mm9_v1_chr5_-_104542598_104542621	113.295	FOX{F1,F2,J1}.p2	AK158725|Sparcl1|13602|SPARC-like 1
mm9_v1_chr5_-_104542751_104542758	91.2105	FOX{F1,F2,J1}.p2	BC003759|Sparcl1|13602|SPARC-like 1
mm9_v1_chr5_-_104542729_104542746	90.7936	FOX{F1,F2,J1}.p2	AK134608|Sparcl1|13602|SPARC-like 1
mm9_v1_chr5_-_104542641_104542708	88.5036	FOX{F1,F2,J1}.p2	U64827|Sparcl1|13602|SPARC-like 1
mm9_v1_chr15_+_91958558_91958558	74.3639	FOX{F1,F2,J1}.p2	NM_007727|Cntn1|12805|contactin 1
mm9_v1_chr16_-_34263047_34263052	61.5019	FOX{F1,F2,J1}.p2	AK159031|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr16_-_34263272_34263285	59.5661	FOX{F1,F2,J1}.p2	AK158544|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr14_-_52533114_52533162	56.8172	FOX{F1,F2,J1}.p2	NM_001145959|Ndrg2|29811|N-myc downstream regulated gene 2	NM_013864|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr14_-_52533039_52533074	56.6046	FOX{F1,F2,J1}.p2	AK158900|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr14_-_52532988_52533037	53.8778	FOX{F1,F2,J1}.p2	BC012963|Ndrg2|29811|N-myc downstream regulated gene 2	AB033921|Ndrg2|29811|N-myc downstream regulated gene 2	AK168011|Ndrg2|29811|N-myc downstream regulated gene 2	AK154597|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr1_-_89470442_89470445	45.0149	FOX{F1,F2,J1}.p2	BC039279|Ngef|53972|neuronal guanine nucleotide exchange factor	NM_001111314|Ngef|53972|neuronal guanine nucleotide exchange factor
mm9_v1_chr5_+_89012596_89012599	41.6406	FOX{F1,F2,J1}.p2	BC049127|Rufy3|52822|RUN and FYVE domain containing 3	NM_027530|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr12_-_85791928_85791966	37.8648	FOX{F1,F2,J1}.p2	AK128924|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK169915|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171896|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK155814|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK170305|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK082790|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK147146|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171581|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr17_-_85461840_85461859	37.2466	FOX{F1,F2,J1}.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr7_-_107805365_107805449	37.2352	FOX{F1,F2,J1}.p2	AK141634|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr5_+_89012537_89012542	37.0065	FOX{F1,F2,J1}.p2	AK013185|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr15_+_91991704_91991862	35.4509	FOX{F1,F2,J1}.p2	NM_001159647|Cntn1|12805|contactin 1	BC066864|Cntn1|12805|contactin 1
mm9_v1_chr2_+_71892681_71892690	33.9852	FOX{F1,F2,J1}.p2	AB445011|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr14_+_28689289_28689352	33.4812	FOX{F1,F2,J1}.p2	AK122265|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2
mm9_v1_chr12_-_85791897_85791926	33.2805	FOX{F1,F2,J1}.p2	AF297860|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	NM_134042|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK164366|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK033587|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr7_+_31076771_31076772	31.5591	FOX{F1,F2,J1}.p2	NM_001081114|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr18_-_39078304_39078358	31.5245	FOX{F1,F2,J1}.p2	U67610|Fgf1|14164|fibroblast growth factor 1	AK035330|Fgf1|14164|fibroblast growth factor 1	NM_010197|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr16_+_5885447_5885760	30.9085	FOX{F1,F2,J1}.p2	AB041596|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AK158194|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr5_+_89012547_89012592	30.4922	FOX{F1,F2,J1}.p2	AK018184|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr15_-_88808967_88808984	30.225	FOX{F1,F2,J1}.p2	AK030396|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	AK043757|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	BC024719|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)	NM_133241|Mlc1|170790|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm9_v1_chr4_+_101180625_101180708	29.7862	FOX{F1,F2,J1}.p2	AK147570|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK147637|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr2_+_20211539_20211581	29.0989	FOX{F1,F2,J1}.p2	NM_001081006|Etl4|208618|enhancer trap locus 4
mm9_v1_chr3_+_7366586_7366727	27.616	FOX{F1,F2,J1}.p2	NM_008862|Pkia|18767|protein kinase inhibitor, alpha	BC048244|Pkia|18767|protein kinase inhibitor, alpha	AK139347|Pkia|18767|protein kinase inhibitor, alpha
mm9_v1_chr7_+_31076852_31076943	27.2549	FOX{F1,F2,J1}.p2	BC138413|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr13_+_59234737_59234835	26.2636	FOX{F1,F2,J1}.p2	AK021108|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr14_-_71029960_71029960	26.1613	FOX{F1,F2,J1}.p2	BC016897|Epb4.9|13829|erythrocyte protein band 4.9	NM_013514|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr15_+_3220766_3220979	25.8749	FOX{F1,F2,J1}.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr2_+_73150702_73150790	24.57	FOX{F1,F2,J1}.p2	NM_029022|Scrn3|74616|secernin 3	AK143725|Scrn3|74616|secernin 3	AK165936|Scrn3|74616|secernin 3	BC139390|Scrn3|74616|secernin 3	BC139391|Scrn3|74616|secernin 3	AK014701|Scrn3|74616|secernin 3	AK050521|Scrn3|74616|secernin 3	AK028703|Scrn3|74616|secernin 3
mm9_v1_chr5_-_53499398_53499436	24.5205	FOX{F1,F2,J1}.p2	AK009811|Sel1l3|231238|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm9_v1_chr4_-_117881591_117881662	24.3658	FOX{F1,F2,J1}.p2	AK135889|Ptprf|19268|protein tyrosine phosphatase, receptor type, F
mm9_v1_chr8_+_46744023_46744252	24.1983	FOX{F1,F2,J1}.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr2_+_121184334_121184455	23.9662	FOX{F1,F2,J1}.p2	AK131953|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	NM_009897|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	Z13968|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK005076|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK018487|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr5_-_71233855_71233855	23.5301	FOX{F1,F2,J1}.p2	AK034332|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1	NM_010252|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm9_v1_chr12_+_71008808_71008844	23.5099	FOX{F1,F2,J1}.p2	AK140185|Atl1|73991|atlastin GTPase 1	AK046919|Atl1|73991|atlastin GTPase 1	BC050784|Atl1|73991|atlastin GTPase 1
mm9_v1_chr18_+_37089837_37089938	23.4533	FOX{F1,F2,J1}.p2	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chrX_-_149078963_149079085	23.3449	FOX{F1,F2,J1}.p2	AK029338|Shroom2|110380|shroom family member 2	AK032256|Shroom2|110380|shroom family member 2	AK049850|Shroom2|110380|shroom family member 2	BC092373|Shroom2|110380|shroom family member 2
mm9_v1_chr1_+_34068669_34068669	23.1839	FOX{F1,F2,J1}.p2	AF396878|Dst|13518|dystonin	AF396879|Dst|13518|dystonin	NM_133833|Dst|13518|dystonin	NM_134448|Dst|13518|dystonin	U22452|Dst|13518|dystonin
mm9_v1_chr18_+_37152024_37152120	22.8882	FOX{F1,F2,J1}.p2	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr15_+_3220994_3220998	22.7098	FOX{F1,F2,J1}.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr1_+_7162595_7162622	22.6402	FOX{F1,F2,J1}.p2	AK018402|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr1_+_34356614_34356645	22.355	FOX{F1,F2,J1}.p2	BC048929|Dst|13518|dystonin
mm9_v1_chr10_+_111708176_111708178	21.637	FOX{F1,F2,J1}.p2	AK045425|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	BC116289|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	BC116290|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	NM_001025581|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2
mm9_v1_chr5_-_104543106_104543114	21.6305	FOX{F1,F2,J1}.p2	NM_010097|Sparcl1|13602|SPARC-like 1
mm9_v1_chrX_+_7496899_7497045	21.4264	FOX{F1,F2,J1}.p2	AF181560|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013892|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AF293356|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK076137|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK002969|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	BC012263|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor
mm9_v1_chr19_-_38199737_38199810	21.4197	FOX{F1,F2,J1}.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr5_-_139606339_139606437	20.4782	FOX{F1,F2,J1}.p2	AK158994|Prkar1b|19085|protein kinase, cAMP dependent regulatory, type I beta
mm9_v1_chr15_+_3220999_3221005	20.16	FOX{F1,F2,J1}.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr5_+_90890764_90890776	19.5599	FOX{F1,F2,J1}.p2	AK050644|Alb|11657|albumin
mm9_v1_chr5_-_122906470_122906515	19.4371	FOX{F1,F2,J1}.p2	AK081191|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr18_+_37133455_37133703	19.3351	FOX{F1,F2,J1}.p2	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr12_-_113749363_113749407	18.9786	FOX{F1,F2,J1}.p2	AK047810|Tmem179|104885|transmembrane protein 179	NM_178915|Tmem179|104885|transmembrane protein 179	BC046482|Tmem179|104885|transmembrane protein 179	AK090230|Tmem179|104885|transmembrane protein 179
mm9_v1_chr10_+_5151833_5151833	18.6825	FOX{F1,F2,J1}.p2	AK041626|Syne1|64009|synaptic nuclear envelope 1	NM_001079686|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr1_+_9591492_9591529	18.4176	FOX{F1,F2,J1}.p2	AK043576|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr7_+_137720997_137721002	18.3163	FOX{F1,F2,J1}.p2	AY177410|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_001004468|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_206856|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	BC109016|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr3_+_62142698_62142868	18.1302	FOX{F1,F2,J1}.p2	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr13_+_97837240_97837241	17.9459	FOX{F1,F2,J1}.p2	BC084589|Fam169a|320557|family with sequence similarity 169, member A	NM_001146045|Fam169a|320557|family with sequence similarity 169, member A
mm9_v1_chr1_+_21208679_21208742	17.7117	FOX{F1,F2,J1}.p2	BC034768|Tmem14a|75712|transmembrane protein 14A	BC060034|Tmem14a|75712|transmembrane protein 14A	NM_029398|Tmem14a|75712|transmembrane protein 14A	AK017734|Tmem14a|75712|transmembrane protein 14A
mm9_v1_chr19_-_58529766_58529841	17.6558	FOX{F1,F2,J1}.p2	BC044783|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AK076171|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr9_+_47338431_47338446	17.3879	FOX{F1,F2,J1}.p2	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr18_+_23468655_23468725	17.3878	FOX{F1,F2,J1}.p2	X95227|Dtna|13527|dystrobrevin alpha
mm9_v1_chrX_-_72823561_72823573	17.3373	FOX{F1,F2,J1}.p2	BC050853|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr9_+_47338255_47338425	17.1501	FOX{F1,F2,J1}.p2	BC090970|Cadm1|54725|cell adhesion molecule 1	AF434663|Cadm1|54725|cell adhesion molecule 1	AK013911|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chrX_+_7299358_7299459	16.877	FOX{F1,F2,J1}.p2	BC011479|Wdr45|54636|WD repeat domain 45	NM_172372|Wdr45|54636|WD repeat domain 45	AF229635|Wdr45|54636|WD repeat domain 45
mm9_v1_chr6_-_148392841_148392873	16.8175	FOX{F1,F2,J1}.p2	AK137545|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1	AK046396|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1	NM_198967|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1
mm9_v1_chr6_+_129483238_129483284	16.7551	FOX{F1,F2,J1}.p2	BC004602|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr13_+_109444370_109444370	16.7139	FOX{F1,F2,J1}.p2	AF536978|Pde4d|238871|phosphodiesterase 4D, cAMP specific	NM_011056|Pde4d|238871|phosphodiesterase 4D, cAMP specific
mm9_v1_chr6_+_129483295_129483425	16.6683	FOX{F1,F2,J1}.p2	AK006103|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK014083|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK015049|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr2_-_73498303_73498483	16.461	FOX{F1,F2,J1}.p2	AB264771|Chn1|108699|chimerin (chimaerin) 1	BC025023|Chn1|108699|chimerin (chimaerin) 1	AK049943|Chn1|108699|chimerin (chimaerin) 1	AK147686|Chn1|108699|chimerin (chimaerin) 1	BC010825|Chn1|108699|chimerin (chimaerin) 1	BC024796|Chn1|108699|chimerin (chimaerin) 1	AK032630|Chn1|108699|chimerin (chimaerin) 1	AK075606|Chn1|108699|chimerin (chimaerin) 1	NM_001166604|Chn1|108699|chimerin (chimaerin) 1	NM_175752|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr4_+_101180580_101180604	16.2445	FOX{F1,F2,J1}.p2	NM_001164584|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164585|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK030374|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK122293|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr9_-_49311823_49311910	16.227	FOX{F1,F2,J1}.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr1_-_134603848_134603902	15.9477	FOX{F1,F2,J1}.p2	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr16_+_29209780_29209780	15.5729	FOX{F1,F2,J1}.p2	AK039471|Hrasls|27281|HRAS-like suppressor	NM_013751|Hrasls|27281|HRAS-like suppressor
mm9_v1_chr1_-_173126368_173126402	15.5665	FOX{F1,F2,J1}.p2	AK032164|Pcp4l1|66425|Purkinje cell protein 4-like 1	AK075738|Pcp4l1|66425|Purkinje cell protein 4-like 1	AK002772|Pcp4l1|66425|Purkinje cell protein 4-like 1	AY304481|Pcp4l1|66425|Purkinje cell protein 4-like 1	NM_025557|Pcp4l1|66425|Purkinje cell protein 4-like 1
mm9_v1_chr7_-_107805466_107805495	15.5624	FOX{F1,F2,J1}.p2	AF071000|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AF100613|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163186|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163187|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chrX_+_7299332_7299351	15.4469	FOX{F1,F2,J1}.p2	AK018409|Wdr45|54636|WD repeat domain 45
mm9_v1_chr15_-_66801093_66801186	15.3963	FOX{F1,F2,J1}.p2	BC141246|Ndrg1|17988|N-myc downstream regulated gene 1	BC171968|Ndrg1|17988|N-myc downstream regulated gene 1	BC015282|Ndrg1|17988|N-myc downstream regulated gene 1	U52073|Ndrg1|17988|N-myc downstream regulated gene 1	BC071235|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr12_+_85792371_85792472	15.2036	FOX{F1,F2,J1}.p2	BC120496|Lin52|217708|lin-52 homolog (C. elegans)	BC137693|Lin52|217708|lin-52 homolog (C. elegans)	AK030923|Lin52|217708|lin-52 homolog (C. elegans)	NM_173756|Lin52|217708|lin-52 homolog (C. elegans)
mm9_v1_chr11_+_78137699_78137848	14.9479	FOX{F1,F2,J1}.p2	AK005077|Aldoc|11676|aldolase C, fructose-bisphosphate	NM_009657|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chr19_-_4012698_4012725	14.9234	FOX{F1,F2,J1}.p2	AK075692|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK005021|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	BC014818|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	NM_133666|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chr19_-_4012654_4012674	14.8616	FOX{F1,F2,J1}.p2	BC041682|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK151455|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chr1_+_173155414_173155449	14.8487	FOX{F1,F2,J1}.p2	X04119|Apoa2|11807|apolipoprotein A-II	S79794|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr14_+_120674921_120674929	14.6358	FOX{F1,F2,J1}.p2	AK151913|Mbnl2|105559|muscleblind-like 2	AK151926|Mbnl2|105559|muscleblind-like 2	AK151957|Mbnl2|105559|muscleblind-like 2	AK028797|Mbnl2|105559|muscleblind-like 2	AK085709|Mbnl2|105559|muscleblind-like 2	AK164372|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr11_+_69435553_69435610	14.5272	FOX{F1,F2,J1}.p2	AK011406|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	AK161230|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	BC061227|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	NM_026991|Sat2|69215|spermidine/spermine N1-acetyl transferase 2
mm9_v1_chr18_-_13021181_13021221	14.508	FOX{F1,F2,J1}.p2	AK168366|Osbpl1a|64291|oxysterol binding protein-like 1A	BC092247|Osbpl1a|64291|oxysterol binding protein-like 1A
mm9_v1_chr14_+_120674939_120674954	14.4878	FOX{F1,F2,J1}.p2	BC079898|Mbnl2|105559|muscleblind-like 2	BC023895|Mbnl2|105559|muscleblind-like 2	AK148740|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr18_+_23468585_23468619	14.3742	FOX{F1,F2,J1}.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr14_+_120674933_120674934	14.3506	FOX{F1,F2,J1}.p2	AK159213|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr10_+_28931448_28931510	14.3488	FOX{F1,F2,J1}.p2	NM_001162537|9330159F19Rik|212448|RIKEN cDNA 9330159F19 gene	AK034141|9330159F19Rik|212448|RIKEN cDNA 9330159F19 gene	BC138279|9330159F19Rik|212448|RIKEN cDNA 9330159F19 gene	BC138282|9330159F19Rik|212448|RIKEN cDNA 9330159F19 gene
mm9_v1_chr6_+_4853319_4853431	14.2177	FOX{F1,F2,J1}.p2	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr6_+_96063137_96063148	14.1673	FOX{F1,F2,J1}.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr2_+_67955769_67955862	14.155	FOX{F1,F2,J1}.p2	NM_020283|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC094660|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132246|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132528|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm9_v1_chr2_+_158201373_158201515	14.0806	FOX{F1,F2,J1}.p2	NM_175692|Snhg11|319317|small nucleolar RNA host gene 11	AK157790|Snhg11|319317|small nucleolar RNA host gene 11	AK080745|Snhg11|319317|small nucleolar RNA host gene 11	AK133939|Snhg11|319317|small nucleolar RNA host gene 11	AK138473|Snhg11|319317|small nucleolar RNA host gene 11	BC049241|Snhg11|319317|small nucleolar RNA host gene 11	BC030414|Snhg11|319317|small nucleolar RNA host gene 11
mm9_v1_chr9_-_102256962_102257026	13.9488	FOX{F1,F2,J1}.p2	BC057301|Ephb1|270190|Eph receptor B1	AK135018|Ephb1|270190|Eph receptor B1	AK033966|Ephb1|270190|Eph receptor B1	AK036211|Ephb1|270190|Eph receptor B1	AK082061|Ephb1|270190|Eph receptor B1	AK039530|Ephb1|270190|Eph receptor B1	NM_001168296|Ephb1|270190|Eph receptor B1	NM_173447|Ephb1|270190|Eph receptor B1
mm9_v1_chr14_+_112074336_112074336	13.9072	FOX{F1,F2,J1}.p2	NM_198865|Slitrk5|75409|SLIT and NTRK-like family, member 5
mm9_v1_chr5_-_103640272_103640352	13.8864	FOX{F1,F2,J1}.p2	AK036275|Mapk10|26414|mitogen-activated protein kinase 10	BC046625|Mapk10|26414|mitogen-activated protein kinase 10	AK163206|Mapk10|26414|mitogen-activated protein kinase 10	AK076990|Mapk10|26414|mitogen-activated protein kinase 10	BC026697|Mapk10|26414|mitogen-activated protein kinase 10	AK082242|Mapk10|26414|mitogen-activated protein kinase 10	NM_001081567|Mapk10|26414|mitogen-activated protein kinase 10	NM_009158|Mapk10|26414|mitogen-activated protein kinase 10
mm9_v1_chr18_+_37854011_37854154	13.8574	FOX{F1,F2,J1}.p2	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr10_-_57252251_57252251	13.6904	FOX{F1,F2,J1}.p2	AK135359|Serinc1|56442|serine incorporator 1
mm9_v1_chr18_+_37112301_37112419	13.6809	FOX{F1,F2,J1}.p2	AK149282|Pcdha4|12936|protocadherin alpha 4	AK048980|Pcdha4|12936|protocadherin alpha 4	BC060211|Pcdha4|12936|protocadherin alpha 4	D86916|Pcdha4|12936|protocadherin alpha 4	NM_007766|Pcdha4|12936|protocadherin alpha 4	AF464180|Pcdha4-g|100384868|protocadherin alpha 4-gamma	NM_001174154|Pcdha4-g|100384868|protocadherin alpha 4-gamma	AY013762|Pcdha4|12936|protocadherin alpha 4
mm9_v1_chr7_-_147268395_147268472	13.6553	FOX{F1,F2,J1}.p2	AK002979|Caly|68566|calcyon neuron-specific vesicular protein	AK163466|Caly|68566|calcyon neuron-specific vesicular protein	AK003400|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190385|Caly|68566|calcyon neuron-specific vesicular protein	NM_026769|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr6_+_141472906_141473070	13.3454	FOX{F1,F2,J1}.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr1_+_181476534_181476659	13.1192	FOX{F1,F2,J1}.p2	AK146681|Cnst|226744|consortin, connexin sorting protein	AK089290|Cnst|226744|consortin, connexin sorting protein	AK036332|Cnst|226744|consortin, connexin sorting protein	AK040899|Cnst|226744|consortin, connexin sorting protein	AK040666|Cnst|226744|consortin, connexin sorting protein	AK087361|Cnst|226744|consortin, connexin sorting protein	BC054802|Cnst|226744|consortin, connexin sorting protein	NM_146105|Cnst|226744|consortin, connexin sorting protein
mm9_v1_chr14_-_122097583_122097657	13.0563	FOX{F1,F2,J1}.p2	BC157964|Dock9|105445|dedicator of cytokinesis 9	NM_001081039|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr1_-_42749940_42749978	12.9235	FOX{F1,F2,J1}.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr16_+_31422377_31422406	12.8381	FOX{F1,F2,J1}.p2	BC043683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_175177|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr12_+_110834872_110834878	12.7508	FOX{F1,F2,J1}.p2	AK038654|1110006E14Rik|76286|RIKEN cDNA 1110006E14 gene
mm9_v1_chr10_+_122701051_122701245	12.6749	FOX{F1,F2,J1}.p2	AK139403|Fam19a2|268354|family with sequence similarity 19, member A2	NM_182807|Fam19a2|268354|family with sequence similarity 19, member A2	AK140763|Fam19a2|268354|family with sequence similarity 19, member A2	BC027082|Fam19a2|268354|family with sequence similarity 19, member A2
mm9_v1_chr1_+_133737686_133737717	12.5837	FOX{F1,F2,J1}.p2	BC037033|Slc41a1|98396|solute carrier family 41, member 1
mm9_v1_chr14_+_69984344_69984396	12.4802	FOX{F1,F2,J1}.p2	AK195341|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK213430|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK218892|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK202804|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4
mm9_v1_chr14_+_120674913_120674920	12.4569	FOX{F1,F2,J1}.p2	AK220470|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr2_-_148701164_148701201	12.4084	FOX{F1,F2,J1}.p2	AK161856|Cst3|13010|cystatin C	AK151160|Cst3|13010|cystatin C	AK013676|Cst3|13010|cystatin C	AK153533|Cst3|13010|cystatin C	AK166430|Cst3|13010|cystatin C
mm9_v1_chr15_-_66801198_66801204	12.3667	FOX{F1,F2,J1}.p2	AK170439|Ndrg1|17988|N-myc downstream regulated gene 1	AK004548|Ndrg1|17988|N-myc downstream regulated gene 1	AK098075|Ndrg1|17988|N-myc downstream regulated gene 1	AK161860|Ndrg1|17988|N-myc downstream regulated gene 1	AK165007|Ndrg1|17988|N-myc downstream regulated gene 1	AK170281|Ndrg1|17988|N-myc downstream regulated gene 1	AK170636|Ndrg1|17988|N-myc downstream regulated gene 1	U60593|Ndrg1|17988|N-myc downstream regulated gene 1	AK170809|Ndrg1|17988|N-myc downstream regulated gene 1	NM_008681|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr1_+_169548381_169548439	12.3436	FOX{F1,F2,J1}.p2	NM_001159731|Rxrg|20183|retinoid X receptor gamma	S62952|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr5_+_89012600_89012641	12.3011	FOX{F1,F2,J1}.p2	AK045610|Rufy3|52822|RUN and FYVE domain containing 3	AK083242|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr15_+_88890519_88890533	12.0503	FOX{F1,F2,J1}.p2	DQ093579|Panx2|406218|pannexin 2
mm9_v1_chr7_+_52104591_52104713	11.9435	FOX{F1,F2,J1}.p2	AK003638|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	NM_026270|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	AK141771|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	AK154110|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	BC132372|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	BC132374|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	AK030571|Akt1s1|67605|AKT1 substrate 1 (proline-rich)
mm9_v1_chr6_-_113841356_113841375	11.9081	FOX{F1,F2,J1}.p2	DQ406822|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK051287|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	BC075643|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_001036684|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr8_-_127093601_127093609	11.8711	FOX{F1,F2,J1}.p2	AK018763|Agt|11606|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)	AK139179|Agt|11606|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)	AK005354|Agt|11606|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)	NM_007428|Agt|11606|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
mm9_v1_chr6_+_129483215_129483234	11.8525	FOX{F1,F2,J1}.p2	AK011975|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK159015|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK167500|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr6_+_22825464_22825502	11.8371	FOX{F1,F2,J1}.p2	AK081698|Ptprz1|19283|protein tyrosine phosphatase, receptor type Z, polypeptide 1	NM_001081306|Ptprz1|19283|protein tyrosine phosphatase, receptor type Z, polypeptide 1
mm9_v1_chr11_+_31900378_31900504	11.7869	FOX{F1,F2,J1}.p2	AK088499|Nsg2|18197|neuron specific gene family member 2	NM_008741|Nsg2|18197|neuron specific gene family member 2	U17259|Nsg2|18197|neuron specific gene family member 2	AK049679|Nsg2|18197|neuron specific gene family member 2	AK075612|Nsg2|18197|neuron specific gene family member 2	AK160712|Nsg2|18197|neuron specific gene family member 2	BC018224|Nsg2|18197|neuron specific gene family member 2	AK041338|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr15_+_99223377_99223451	11.7861	FOX{F1,F2,J1}.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr4_-_118162354_118162375	11.7725	FOX{F1,F2,J1}.p2	X71425|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X73960|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC057004|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC060182|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK052192|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK161898|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC046452|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr2_-_127481868_127482018	11.7174	FOX{F1,F2,J1}.p2	Y07812|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	Y07626|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	BC006826|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	AK169172|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	AK019046|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	AK004639|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein
mm9_v1_chr18_-_12978106_12978267	11.6014	FOX{F1,F2,J1}.p2	BC057194|Osbpl1a|64291|oxysterol binding protein-like 1A	AF394063|Osbpl1a|64291|oxysterol binding protein-like 1A	AK133806|Osbpl1a|64291|oxysterol binding protein-like 1A
mm9_v1_chr4_-_118162385_118162453	11.583	FOX{F1,F2,J1}.p2	AK052413|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK051512|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_011587|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr4_-_62815137_62815208	11.5434	FOX{F1,F2,J1}.p2	X68680|Ambp|11699|alpha 1 microglobulin/bikunin	AK004907|Ambp|11699|alpha 1 microglobulin/bikunin	D28812|Ambp|11699|alpha 1 microglobulin/bikunin	NM_007443|Ambp|11699|alpha 1 microglobulin/bikunin	BC021660|Ambp|11699|alpha 1 microglobulin/bikunin
mm9_v1_chr2_+_26828935_26829056	11.3855	FOX{F1,F2,J1}.p2	AB071302|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	NM_001001322|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AK157459|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AB112362|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	EU034706|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
mm9_v1_chr1_+_9591550_9591585	11.2486	FOX{F1,F2,J1}.p2	BC066997|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr6_+_129483154_129483185	11.1803	FOX{F1,F2,J1}.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr9_-_107571294_107571298	11.1594	FOX{F1,F2,J1}.p2	BC055339|Slc38a3|76257|solute carrier family 38, member 3
mm9_v1_chr13_-_111070225_111070335	11.0519	FOX{F1,F2,J1}.p2	AB232589|Rab3c|67295|RAB3C, member RAS oncogene family	AF312037|Rab3c|67295|RAB3C, member RAS oncogene family	AJ310532|Rab3c|67295|RAB3C, member RAS oncogene family	BC114335|Rab3c|67295|RAB3C, member RAS oncogene family	AY026947|Rab3c|67295|RAB3C, member RAS oncogene family	AK079574|Rab3c|67295|RAB3C, member RAS oncogene family	AK148904|Rab3c|67295|RAB3C, member RAS oncogene family	AK014132|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr10_+_94038001_94038001	10.9846	FOX{F1,F2,J1}.p2	BC026867|Tmcc3|319880|transmembrane and coiled coil domains 3	NM_001168684|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr3_-_97692613_97692634	10.9502	FOX{F1,F2,J1}.p2	BC028274|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	BC141185|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	BC145504|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_001039376|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr6_-_60779848_60779848	10.9496	FOX{F1,F2,J1}.p2	AF179273|Snca|20617|synuclein, alpha	NM_009221|Snca|20617|synuclein, alpha
mm9_v1_chr16_+_42955690_42955696	10.9342	FOX{F1,F2,J1}.p2	BC002163|BC002163|170658|NADH dehydrogenase Fe-S protein 5 pseudogene
mm9_v1_chr2_-_71205805_71205881	10.9269	FOX{F1,F2,J1}.p2	BC024952|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr14_-_104243541_104243687	10.795	FOX{F1,F2,J1}.p2	BC026553|Ednrb|13618|endothelin receptor type B
mm9_v1_chr8_+_73051625_73051647	10.7128	FOX{F1,F2,J1}.p2	AK170993|Fkbp8|14232|FK506 binding protein 8	NM_001111066|Fkbp8|14232|FK506 binding protein 8	NM_010223|Fkbp8|14232|FK506 binding protein 8	AK152198|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr7_-_125263314_125263384	10.6532	FOX{F1,F2,J1}.p2	AK004228|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK012904|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK005514|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr15_-_63891810_63892112	10.5968	FOX{F1,F2,J1}.p2	AK075613|Fam49b|223601|family with sequence similarity 49, member B	AK043641|Fam49b|223601|family with sequence similarity 49, member B	AK028062|Fam49b|223601|family with sequence similarity 49, member B	NM_144846|Fam49b|223601|family with sequence similarity 49, member B
mm9_v1_chr7_+_148817700_148817712	10.5355	FOX{F1,F2,J1}.p2	BC049878|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr10_-_57252252_57252346	10.3992	FOX{F1,F2,J1}.p2	AF181685|Serinc1|56442|serine incorporator 1	AK148745|Serinc1|56442|serine incorporator 1	AK050514|Serinc1|56442|serine incorporator 1	AB029500|Serinc1|56442|serine incorporator 1	AK088340|Serinc1|56442|serine incorporator 1	AK133668|Serinc1|56442|serine incorporator 1	AK133975|Serinc1|56442|serine incorporator 1	AK161707|Serinc1|56442|serine incorporator 1	AK005203|Serinc1|56442|serine incorporator 1	AK167817|Serinc1|56442|serine incorporator 1	AK002847|Serinc1|56442|serine incorporator 1	AK141574|Serinc1|56442|serine incorporator 1	AK160498|Serinc1|56442|serine incorporator 1	AK159436|Serinc1|56442|serine incorporator 1	BC006940|Serinc1|56442|serine incorporator 1	NM_019760|Serinc1|56442|serine incorporator 1
mm9_v1_chr15_+_97942484_97942592	10.3548	FOX{F1,F2,J1}.p2	D21868|Pfkm|18642|phosphofructokinase, muscle	NM_021514|Pfkm|18642|phosphofructokinase, muscle	BC005526|Pfkm|18642|phosphofructokinase, muscle	AF249894|Pfkm|18642|phosphofructokinase, muscle	D21865|Pfkm|18642|phosphofructokinase, muscle
mm9_v1_chr6_+_49773596_49773680	10.275	FOX{F1,F2,J1}.p2	AF273768|Npy|109648|neuropeptide Y	AF286198|Npy|109648|neuropeptide Y	AF286199|Npy|109648|neuropeptide Y
mm9_v1_chr3_+_105916283_105916305	10.2144	FOX{F1,F2,J1}.p2	AK007573|Chia|81600|chitinase, acidic	AK008633|Chia|81600|chitinase, acidic	AK008650|Chia|81600|chitinase, acidic	AK008757|Chia|81600|chitinase, acidic	AK160173|Chia|81600|chitinase, acidic	BC034548|Chia|81600|chitinase, acidic	NM_023186|Chia|81600|chitinase, acidic	AF290003|Chia|81600|chitinase, acidic	DQ349202|Chia|81600|chitinase, acidic	EF094027|Chia|81600|chitinase, acidic	BC011134|Chia|81600|chitinase, acidic	AF154571|Chia|81600|chitinase, acidic
mm9_v1_chr9_-_107571304_107571323	10.2015	FOX{F1,F2,J1}.p2	BC021324|Slc38a3|76257|solute carrier family 38, member 3
mm9_v1_chr8_-_87297283_87297318	10.2001	FOX{F1,F2,J1}.p2	BC090626|Nfix|18032|nuclear factor I/X
mm9_v1_chr7_-_93924317_93924373	10.1706	FOX{F1,F2,J1}.p2	BC119604|Folh1|53320|folate hydrolase	BC119605|Folh1|53320|folate hydrolase	AK002920|Folh1|53320|folate hydrolase	AF026380|Folh1|53320|folate hydrolase	AK090289|Folh1|53320|folate hydrolase	NM_001159706|Folh1|53320|folate hydrolase	NM_016770|Folh1|53320|folate hydrolase
mm9_v1_chr19_+_53403902_53404133	10.0995	FOX{F1,F2,J1}.p2	NM_010847|Mxi1|17859|Max interacting protein 1	AK144219|Mxi1|17859|Max interacting protein 1	AK017637|Mxi1|17859|Max interacting protein 1	AK140465|Mxi1|17859|Max interacting protein 1	L38822|Mxi1|17859|Max interacting protein 1	U24674|Mxi1|17859|Max interacting protein 1
mm9_v1_chr11_-_97372344_97372370	10.0451	FOX{F1,F2,J1}.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr7_-_26460180_26460184	9.97078	FOX{F1,F2,J1}.p2	AK079312|Tmem91|320208|transmembrane protein 91	NM_177102|Tmem91|320208|transmembrane protein 91
mm9_v1_chr2_-_91019477_91019477	9.91468	FOX{F1,F2,J1}.p2	NM_001177720|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr9_-_73781373_73781373	9.89675	FOX{F1,F2,J1}.p2	NM_001081153|Unc13c|208898|unc-13 homolog C (C. elegans)
mm9_v1_chr14_-_94287950_94288026	9.88735	FOX{F1,F2,J1}.p2	NM_001081377|Pcdh9|211712|protocadherin 9	BC157952|Pcdh9|211712|protocadherin 9	BC172098|Pcdh9|211712|protocadherin 9	BC158114|Pcdh9|211712|protocadherin 9	BC158117|Pcdh9|211712|protocadherin 9
mm9_v1_chr19_-_29101759_29101824	9.8799	FOX{F1,F2,J1}.p2	
mm9_v1_chr1_-_182126032_182126150	9.77389	FOX{F1,F2,J1}.p2	AK004791|Adck3|67426|aarF domain containing kinase 3	AK014605|Adck3|67426|aarF domain containing kinase 3	BC030937|Adck3|67426|aarF domain containing kinase 3	NM_023341|Adck3|67426|aarF domain containing kinase 3
mm9_v1_chr8_+_73051648_73051650	9.72512	FOX{F1,F2,J1}.p2	AK153000|Fkbp8|14232|FK506 binding protein 8	AK165281|Fkbp8|14232|FK506 binding protein 8	AK146122|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr12_+_105576693_105576718	9.67426	FOX{F1,F2,J1}.p2	AK149436|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	NM_011458|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	AK004842|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	BC016407|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	X56786|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	X55147|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	D00725|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	BC011217|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K	BC019802|Serpina3k|20714|serine (or cysteine) peptidase inhibitor, clade A, member 3K
mm9_v1_chr6_+_129483206_129483210	9.66969	FOX{F1,F2,J1}.p2	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr5_-_113709569_113709620	9.63576	FOX{F1,F2,J1}.p2	AK167632|Sgsm1|52850|small G protein signaling modulator 1	AK010756|Sgsm1|52850|small G protein signaling modulator 1	AK051018|Sgsm1|52850|small G protein signaling modulator 1
mm9_v1_chr8_+_73051651_73051898	9.58036	FOX{F1,F2,J1}.p2	AK167663|Fkbp8|14232|FK506 binding protein 8	AK158155|Fkbp8|14232|FK506 binding protein 8	AY278608|Fkbp8|14232|FK506 binding protein 8	BC027808|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr11_-_107209443_107209486	9.56735	FOX{F1,F2,J1}.p2	AK021206|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr17_+_75835208_75835359	9.43521	FOX{F1,F2,J1}.p2	NM_001166493|Rasgrp3|240168|RAS, guanyl releasing protein 3	AK173041|Rasgrp3|240168|RAS, guanyl releasing protein 3
mm9_v1_chr9_+_47338449_47338455	9.37281	FOX{F1,F2,J1}.p2	AK013775|Cadm1|54725|cell adhesion molecule 1	AB064265|Cadm1|54725|cell adhesion molecule 1	AB092414|Cadm1|54725|cell adhesion molecule 1	AB183399|Cadm1|54725|cell adhesion molecule 1	AB183400|Cadm1|54725|cell adhesion molecule 1	AB183401|Cadm1|54725|cell adhesion molecule 1	AB183402|Cadm1|54725|cell adhesion molecule 1	AY351388|Cadm1|54725|cell adhesion molecule 1	DQ279856|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr6_-_113841295_113841343	9.25401	FOX{F1,F2,J1}.p2	AK147357|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr12_+_105644917_105644968	9.2161	FOX{F1,F2,J1}.p2	NM_009252|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N	BC013651|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N	M64086|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N
mm9_v1_chr9_+_46036788_46036792	9.2038	FOX{F1,F2,J1}.p2	AK076187|Apoa1|11806|apolipoprotein A-I	AK131864|Apoa1|11806|apolipoprotein A-I	AK149576|Apoa1|11806|apolipoprotein A-I	AK161536|Apoa1|11806|apolipoprotein A-I	X64262|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr7_+_107423813_107423829	9.1712	FOX{F1,F2,J1}.p2	AK164085|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr15_+_99223622_99223695	9.06876	FOX{F1,F2,J1}.p2	NM_001171035|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr7_-_26460133_26460159	9.06577	FOX{F1,F2,J1}.p2	BC058996|Tmem91|320208|transmembrane protein 91	AK043858|Tmem91|320208|transmembrane protein 91	AK086094|Tmem91|320208|transmembrane protein 91
mm9_v1_chr18_+_37844927_37845053	9.0403	FOX{F1,F2,J1}.p2	BC049814|Pcdhga4|93712|protocadherin gamma subfamily A, 4	AY013798|Pcdhga4|93712|protocadherin gamma subfamily A, 4	NM_033587|Pcdhga4|93712|protocadherin gamma subfamily A, 4
mm9_v1_chr1_-_94538517_94538563	8.98398	FOX{F1,F2,J1}.p2	AK152318|Myeov2|66915|myeloma overexpressed 2	AK012198|Myeov2|66915|myeloma overexpressed 2	AK003315|Myeov2|66915|myeloma overexpressed 2	BC147334|Myeov2|66915|myeloma overexpressed 2	BC147335|Myeov2|66915|myeloma overexpressed 2	BC147659|Myeov2|66915|myeloma overexpressed 2	BC147669|Myeov2|66915|myeloma overexpressed 2	BC049759|Myeov2|66915|myeloma overexpressed 2	NM_001163425|Myeov2|66915|myeloma overexpressed 2
mm9_v1_chr19_-_42160732_42160861	8.97334	FOX{F1,F2,J1}.p2	AK180979|Morn4|226123|MORN repeat containing 4	AK214121|Morn4|226123|MORN repeat containing 4	BC023055|Morn4|226123|MORN repeat containing 4	AK159230|Morn4|226123|MORN repeat containing 4	AK154147|Morn4|226123|MORN repeat containing 4	NM_198108|Morn4|226123|MORN repeat containing 4
mm9_v1_chr11_-_103733519_103733644	8.82955	FOX{F1,F2,J1}.p2	AK214505|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK208793|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK203353|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK213251|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK028415|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr17_+_24546733_24546845	8.73294	FOX{F1,F2,J1}.p2	BC038271|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr3_-_146432922_146432972	8.71277	FOX{F1,F2,J1}.p2	AK139419|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr7_-_52104247_52104292	8.64598	FOX{F1,F2,J1}.p2	BC035449|Tbc1d17|233204|TBC1 domain family, member 17	AK081318|Tbc1d17|233204|TBC1 domain family, member 17	AK149917|Tbc1d17|233204|TBC1 domain family, member 17	AK153732|Tbc1d17|233204|TBC1 domain family, member 17	AK170821|Tbc1d17|233204|TBC1 domain family, member 17	AK039566|Tbc1d17|233204|TBC1 domain family, member 17	AK083153|Tbc1d17|233204|TBC1 domain family, member 17	AK136705|Tbc1d17|233204|TBC1 domain family, member 17	AK087754|Tbc1d17|233204|TBC1 domain family, member 17	AK046883|Tbc1d17|233204|TBC1 domain family, member 17
mm9_v1_chr5_-_138181225_138181225	8.59498	FOX{F1,F2,J1}.p2	AB429289|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene	BC057372|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene	NM_175521|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene
mm9_v1_chr11_+_69867869_69867875	8.55072	FOX{F1,F2,J1}.p2	NM_009714|Asgr1|11889|asialoglycoprotein receptor 1
mm9_v1_chr2_+_164311755_164311970	8.54656	FOX{F1,F2,J1}.p2	BC030298|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_026797|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr19_-_21467250_21467261	8.5393	FOX{F1,F2,J1}.p2	AK080065|Gda|14544|guanine deaminase
mm9_v1_chr1_+_91351373_91351428	8.40136	FOX{F1,F2,J1}.p2	AK147503|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037136|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_178119|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK046523|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK129289|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr3_+_88373199_88373199	8.34916	FOX{F1,F2,J1}.p2	AK207994|Ubqln4|94232|ubiquilin 4
mm9_v1_chr12_+_38607291_38607482	8.2981	FOX{F1,F2,J1}.p2	AK139408|Dgkb|217480|diacylglycerol kinase, beta	NM_178681|Dgkb|217480|diacylglycerol kinase, beta	AK083222|Dgkb|217480|diacylglycerol kinase, beta	AK047682|Dgkb|217480|diacylglycerol kinase, beta	AK044516|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr6_+_38484796_38484868	8.29435	FOX{F1,F2,J1}.p2	AK003231|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	BC059710|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK008291|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	NM_025363|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK009186|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene
mm9_v1_chr10_-_57252184_57252250	8.28368	FOX{F1,F2,J1}.p2	BC017148|Serinc1|56442|serine incorporator 1	AK159280|Serinc1|56442|serine incorporator 1
mm9_v1_chr1_-_170085798_170085873	8.2301	FOX{F1,F2,J1}.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr1_-_174128558_174128619	8.21655	FOX{F1,F2,J1}.p2	BC092079|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr8_-_47209499_47209499	8.04522	FOX{F1,F2,J1}.p2	NM_207213|Snx25|102141|sorting nexin 25
mm9_v1_chr8_+_96334879_96334940	8.02886	FOX{F1,F2,J1}.p2	BC051989|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr2_-_32702729_32702816	8.02687	FOX{F1,F2,J1}.p2	NM_009295|Stxbp1|20910|syntaxin binding protein 1	NM_001113569|Stxbp1|20910|syntaxin binding protein 1
mm9_v1_chr11_+_16157685_16157805	7.95349	FOX{F1,F2,J1}.p2	AK033048|Vstm2a|211739|V-set and transmembrane domain containing 2A	NM_145967|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK032473|Vstm2a|211739|V-set and transmembrane domain containing 2A	BC027127|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK079096|Vstm2a|211739|V-set and transmembrane domain containing 2A	AK137363|Vstm2a|211739|V-set and transmembrane domain containing 2A
mm9_v1_chr16_+_7409879_7410026	7.92747	FOX{F1,F2,J1}.p2	AK034297|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr7_-_52104448_52104476	7.81446	FOX{F1,F2,J1}.p2	BC017607|Tbc1d17|233204|TBC1 domain family, member 17	NM_001042655|Tbc1d17|233204|TBC1 domain family, member 17
mm9_v1_chr9_+_46036799_46036808	7.7725	FOX{F1,F2,J1}.p2	L04151|Apoa1|11806|apolipoprotein A-I	BC091745|Apoa1|11806|apolipoprotein A-I	BC019837|Apoa1|11806|apolipoprotein A-I	BC012253|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr16_-_31314534_31314685	7.71	FOX{F1,F2,J1}.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr3_-_59024076_59024180	7.70405	FOX{F1,F2,J1}.p2	AK014807|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr8_+_12949417_12949485	7.69699	FOX{F1,F2,J1}.p2	NM_001159485|Mcf2l|17207|mcf.2 transforming sequence-like	NM_001159486|Mcf2l|17207|mcf.2 transforming sequence-like	AK170186|Mcf2l|17207|mcf.2 transforming sequence-like	AK170558|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr12_-_32184404_32184480	7.69346	FOX{F1,F2,J1}.p2	BC019529|Cbll1|104836|Casitas B-lineage lymphoma-like 1	NM_134048|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AK049141|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AK051737|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AK166017|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AF167441|Cbll1|104836|Casitas B-lineage lymphoma-like 1
mm9_v1_chr7_-_52230091_52230104	7.65204	FOX{F1,F2,J1}.p2	AK087747|Cpt1c|78070|carnitine palmitoyltransferase 1c	BC083317|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr9_+_72584532_72584702	7.64881	FOX{F1,F2,J1}.p2	BC007184|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr4_-_96220030_96220248	7.64156	FOX{F1,F2,J1}.p2	AK180579|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK186838|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK193212|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK210777|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK078893|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK165663|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK038636|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6
mm9_v1_chr1_+_91351435_91351522	7.63403	FOX{F1,F2,J1}.p2	BC096588|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr6_-_126658429_126658452	7.6243	FOX{F1,F2,J1}.p2	
mm9_v1_chr10_-_87937335_87937390	7.58763	FOX{F1,F2,J1}.p2	AK080245|Chpt1|212862|choline phosphotransferase 1
mm9_v1_chr1_-_181476342_181476404	7.58559	FOX{F1,F2,J1}.p2	BC138836|Tfb2m|15278|transcription factor B2, mitochondrial	BC138837|Tfb2m|15278|transcription factor B2, mitochondrial	AK167930|Tfb2m|15278|transcription factor B2, mitochondrial	M74555|Tfb2m|15278|transcription factor B2, mitochondrial	AK090106|Tfb2m|15278|transcription factor B2, mitochondrial	AK168970|Tfb2m|15278|transcription factor B2, mitochondrial	AK169138|Tfb2m|15278|transcription factor B2, mitochondrial	AK166717|Tfb2m|15278|transcription factor B2, mitochondrial	AK146563|Tfb2m|15278|transcription factor B2, mitochondrial	NM_008249|Tfb2m|15278|transcription factor B2, mitochondrial
mm9_v1_chr8_+_73053432_73053453	7.58108	FOX{F1,F2,J1}.p2	AB154247|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr10_+_20760625_20760625	7.56119	FOX{F1,F2,J1}.p2	AK161335|Ahi1|52906|Abelson helper integration site 1	NM_001177776|Ahi1|52906|Abelson helper integration site 1
mm9_v1_chr14_+_102237708_102237728	7.52287	FOX{F1,F2,J1}.p2	BC082553|Lmo7|380928|LIM domain only 7
mm9_v1_chr12_+_70397702_70397722	7.51278	FOX{F1,F2,J1}.p2	AK082528|Klhdc2|69554|kelch domain containing 2	AY513272|Klhdc2|69554|kelch domain containing 2
mm9_v1_chr14_-_104213981_104213985	7.47732	FOX{F1,F2,J1}.p2	
mm9_v1_chr7_-_91520991_91521040	7.46852	FOX{F1,F2,J1}.p2	AK032628|Arnt2|11864|aryl hydrocarbon receptor nuclear translocator 2
mm9_v1_chr8_-_11199802_11199859	7.45461	FOX{F1,F2,J1}.p2	X92439|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr2_-_32702610_32702727	7.44257	FOX{F1,F2,J1}.p2	AF326545|Stxbp1|20910|syntaxin binding protein 1	AF326563|Stxbp1|20910|syntaxin binding protein 1	D45903|Stxbp1|20910|syntaxin binding protein 1	BC031728|Stxbp1|20910|syntaxin binding protein 1
mm9_v1_chr15_+_78744328_78744471	7.40398	FOX{F1,F2,J1}.p2	BC049107|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	NM_020271|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AY366300|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AK043228|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	BC046955|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AB041662|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase
mm9_v1_chr1_-_52714729_52714742	7.38965	FOX{F1,F2,J1}.p2	BC016598|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr18_+_45428413_45428658	7.36788	FOX{F1,F2,J1}.p2	AK076494|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK033158|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr13_+_4058817_4058874	7.29234	FOX{F1,F2,J1}.p2	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chr11_+_22872016_22872058	7.23084	FOX{F1,F2,J1}.p2	NM_011663|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	D17407|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	S69507|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm9_v1_chr3_+_64913564_64913693	7.20872	FOX{F1,F2,J1}.p2	BC014701|Kcnab1|16497|potassium voltage-gated channel, shaker-related subfamily, beta member 1	NM_010597|Kcnab1|16497|potassium voltage-gated channel, shaker-related subfamily, beta member 1	U65591|Kcnab1|16497|potassium voltage-gated channel, shaker-related subfamily, beta member 1
mm9_v1_chr3_-_146433200_146433208	7.18087	FOX{F1,F2,J1}.p2	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr8_+_65430028_65430291	7.17712	FOX{F1,F2,J1}.p2	AJ278998|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK049843|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK220280|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK013644|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC017601|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	NM_023689|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK164338|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC053334|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm9_v1_chr8_+_73053287_73053425	7.16958	FOX{F1,F2,J1}.p2	BC003739|Fkbp8|14232|FK506 binding protein 8	AY225340|Fkbp8|14232|FK506 binding protein 8	AK216136|Fkbp8|14232|FK506 binding protein 8	AF030635|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr7_-_72516109_72516162	7.15784	FOX{F1,F2,J1}.p2	D14340|Tjp1|21872|tight junction protein 1	NM_001163574|Tjp1|21872|tight junction protein 1	NM_009386|Tjp1|21872|tight junction protein 1
mm9_v1_chr9_-_21822333_21822348	7.12055	FOX{F1,F2,J1}.p2	AK078068|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr2_-_71205587_71205679	7.10376	FOX{F1,F2,J1}.p2	BC013845|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC060505|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK019150|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK083156|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_172436|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK147948|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK030595|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK144958|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK208043|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr10_+_110943341_110943375	7.05705	FOX{F1,F2,J1}.p2	NM_009344|Phlda1|21664|pleckstrin homology-like domain, family A, member 1	U44088|Phlda1|21664|pleckstrin homology-like domain, family A, member 1
mm9_v1_chr2_-_148701126_148701154	7.01797	FOX{F1,F2,J1}.p2	M59470|Cst3|13010|cystatin C	BC002072|Cst3|13010|cystatin C
mm9_v1_chr7_-_17501647_17501670	6.95843	FOX{F1,F2,J1}.p2	AK049104|Calm3|12315|calmodulin 3
mm9_v1_chr3_+_107698740_107698844	6.94815	FOX{F1,F2,J1}.p2	AK028098|Gstm5|14866|glutathione S-transferase, mu 5	NM_010360|Gstm5|14866|glutathione S-transferase, mu 5	U24428|Gstm5|14866|glutathione S-transferase, mu 5	BC008206|Gstm5|14866|glutathione S-transferase, mu 5	AK019317|Gstm5|14866|glutathione S-transferase, mu 5	AK002750|Gstm5|14866|glutathione S-transferase, mu 5
mm9_v1_chr12_+_70397667_70397700	6.89647	FOX{F1,F2,J1}.p2	AK078408|Klhdc2|69554|kelch domain containing 2	NM_027117|Klhdc2|69554|kelch domain containing 2
mm9_v1_chr2_-_44717141_44717141	6.85339	FOX{F1,F2,J1}.p2	AK054272|Gtdc1|227835|glycosyltransferase-like domain containing 1	NM_172662|Gtdc1|227835|glycosyltransferase-like domain containing 1
mm9_v1_chr14_-_31736727_31736772	6.82575	FOX{F1,F2,J1}.p2	X70393|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	BC015276|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	AK146700|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	NM_008407|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3
mm9_v1_chr4_-_96258099_96258268	6.80415	FOX{F1,F2,J1}.p2	BC119556|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AK018422|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AK033961|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AF336850|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	NM_028979|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AK037031|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9
mm9_v1_chr11_-_118355393_118355538	6.78892	FOX{F1,F2,J1}.p2	
mm9_v1_chr10_+_56097078_56097350	6.77868	FOX{F1,F2,J1}.p2	AY427554|Gja1|14609|gap junction protein, alpha 1	AY427555|Gja1|14609|gap junction protein, alpha 1	NM_010288|Gja1|14609|gap junction protein, alpha 1	M63801|Gja1|14609|gap junction protein, alpha 1	AK011459|Gja1|14609|gap junction protein, alpha 1	AK036979|Gja1|14609|gap junction protein, alpha 1	AK145692|Gja1|14609|gap junction protein, alpha 1	AK161997|Gja1|14609|gap junction protein, alpha 1	AK171955|Gja1|14609|gap junction protein, alpha 1	AY427560|Gja1|14609|gap junction protein, alpha 1	BC006894|Gja1|14609|gap junction protein, alpha 1	BC055375|Gja1|14609|gap junction protein, alpha 1	AK029291|Gja1|14609|gap junction protein, alpha 1	AK165986|Gja1|14609|gap junction protein, alpha 1	X61576|Gja1|14609|gap junction protein, alpha 1	AY427556|Gja1|14609|gap junction protein, alpha 1	AY427557|Gja1|14609|gap junction protein, alpha 1	AY427558|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chr14_-_88871202_88871202	6.7687	FOX{F1,F2,J1}.p2	AK083114|Pcdh20|219257|protocadherin 20	NM_178685|Pcdh20|219257|protocadherin 20
mm9_v1_chr9_-_86581204_86581205	6.72996	FOX{F1,F2,J1}.p2	AK163278|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK163403|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	NM_001198933|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic
mm9_v1_chrX_+_133242520_133242603	6.72699	FOX{F1,F2,J1}.p2	BC083157|Tceal1|237052|transcription elongation factor A (SII)-like 1	BC011290|Tceal1|237052|transcription elongation factor A (SII)-like 1	NM_146236|Tceal1|237052|transcription elongation factor A (SII)-like 1
mm9_v1_chr2_+_102546576_102546605	6.72016	FOX{F1,F2,J1}.p2	AB007812|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138255|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138256|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077515|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_011393|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AB007811|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr6_+_121956815_121956815	6.69415	FOX{F1,F2,J1}.p2	M65238|Mug2|17837|murinoglobulin 2	NM_008646|Mug2|17837|murinoglobulin 2
mm9_v1_chr10_+_110943412_110943638	6.65912	FOX{F1,F2,J1}.p2	AK158890|Phlda1|21664|pleckstrin homology-like domain, family A, member 1	AK148063|Phlda1|21664|pleckstrin homology-like domain, family A, member 1
mm9_v1_chr16_+_17331507_17331521	6.61679	FOX{F1,F2,J1}.p2	BC089610|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr12_-_15823536_15823550	6.60292	FOX{F1,F2,J1}.p2	BC037387|Trib2|217410|tribbles homolog 2 (Drosophila)	AK044747|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr11_-_118162557_118162687	6.59566	FOX{F1,F2,J1}.p2	
mm9_v1_chr3_-_27795287_27795289	6.53876	FOX{F1,F2,J1}.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr11_-_6333725_6333827	6.43603	FOX{F1,F2,J1}.p2	AK178770|H2afv|77605|H2A histone family, member V
mm9_v1_chr9_-_48644030_48644051	6.40634	FOX{F1,F2,J1}.p2	AK040211|Zbtb16|235320|zinc finger and BTB domain containing 16	AK142947|Zbtb16|235320|zinc finger and BTB domain containing 16	NM_001033324|Zbtb16|235320|zinc finger and BTB domain containing 16
mm9_v1_chr6_+_37755974_37756050	6.40343	FOX{F1,F2,J1}.p2	AK170346|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK146159|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC126881|Atp6v0c-ps2|100039636|ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2
mm9_v1_chr3_-_146433544_146433656	6.39823	FOX{F1,F2,J1}.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr10_+_126857922_126857922	6.39746	FOX{F1,F2,J1}.p2	AK043545|R3hdm2|71750|R3H domain containing 2	NM_001168293|R3hdm2|71750|R3H domain containing 2	NM_027900|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr8_+_56122680_56122847	6.30617	FOX{F1,F2,J1}.p2	BC023461|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr14_-_122196929_122196955	6.26605	FOX{F1,F2,J1}.p2	NM_134074|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr13_-_115078961_115078988	6.21885	FOX{F1,F2,J1}.p2	AK035175|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm9_v1_chr5_-_92872646_92872657	6.1979	FOX{F1,F2,J1}.p2	AK034388|Scarb2|12492|scavenger receptor class B, member 2
mm9_v1_chr5_-_93611701_93611836	6.18142	FOX{F1,F2,J1}.p2	
mm9_v1_chr7_+_134072351_134072419	6.17784	FOX{F1,F2,J1}.p2	AK075722|Kctd13|233877|potassium channel tetramerisation domain containing 13	NM_172747|Kctd13|233877|potassium channel tetramerisation domain containing 13	BC079607|Kctd13|233877|potassium channel tetramerisation domain containing 13	AF534881|Kctd13|233877|potassium channel tetramerisation domain containing 13
mm9_v1_chr9_-_112090150_112090479	6.17539	FOX{F1,F2,J1}.p2	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr16_+_22920274_22920459	6.16965	FOX{F1,F2,J1}.p2	NM_001083904|Fetub|59083|fetuin beta	NM_021564|Fetub|59083|fetuin beta	AY138459|Fetub|59083|fetuin beta	AJ242927|Fetub|59083|fetuin beta
mm9_v1_chr13_-_32873647_32873647	6.1245	FOX{F1,F2,J1}.p2	NM_001166030|Mylk4|238564|myosin light chain kinase family, member 4
mm9_v1_chr8_-_70342105_70342226	6.11942	FOX{F1,F2,J1}.p2	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr3_+_87834761_87834802	6.10763	FOX{F1,F2,J1}.p2	
mm9_v1_chr17_-_37160143_37160232	6.10103	FOX{F1,F2,J1}.p2	AY566830|Mog|17441|myelin oligodendrocyte glycoprotein	BC080860|Mog|17441|myelin oligodendrocyte glycoprotein	U64572|Mog|17441|myelin oligodendrocyte glycoprotein	BC050763|Mog|17441|myelin oligodendrocyte glycoprotein	AK135036|Mog|17441|myelin oligodendrocyte glycoprotein
mm9_v1_chr2_+_138104219_138104260	6.09966	FOX{F1,F2,J1}.p2	AB093275|Btbd3|228662|BTB (POZ) domain containing 3	NM_145534|Btbd3|228662|BTB (POZ) domain containing 3	BC018174|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr7_+_88907871_88907915	6.05479	FOX{F1,F2,J1}.p2	AK150938|Fam103a1|67148|family with sequence similarity 103, member A1	BC091760|Fam103a1|67148|family with sequence similarity 103, member A1	AK010694|Fam103a1|67148|family with sequence similarity 103, member A1	BC096399|Fam103a1|67148|family with sequence similarity 103, member A1	BC058367|Fam103a1|67148|family with sequence similarity 103, member A1
mm9_v1_chr5_-_146691425_146691448	6.05043	FOX{F1,F2,J1}.p2	BC094062|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	X60452|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	BC010528|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	NM_007818|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	AK149433|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11
mm9_v1_chr13_+_4433567_4433656	5.99807	FOX{F1,F2,J1}.p2	AK149458|Akr1c6|83702|aldo-keto reductase family 1, member C6	NM_030611|Akr1c6|83702|aldo-keto reductase family 1, member C6	BC056643|Akr1c6|83702|aldo-keto reductase family 1, member C6	D45850|Akr1c6|83702|aldo-keto reductase family 1, member C6
mm9_v1_chr16_-_10447440_10447456	5.97367	FOX{F1,F2,J1}.p2	BC068110|Fam18a|383103|family with sequence similarity 18, member A	NM_001013778|Fam18a|383103|family with sequence similarity 18, member A
mm9_v1_chr1_+_108068405_108068445	5.96394	FOX{F1,F2,J1}.p2	NM_133821|Phlpp1|98432|PH domain and leucine rich repeat protein phosphatase 1
mm9_v1_chr12_-_104895280_104895290	5.94728	FOX{F1,F2,J1}.p2	NM_007618|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6	X70533|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr7_-_52230179_52230183	5.93101	FOX{F1,F2,J1}.p2	AK035790|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr2_+_24935818_24936028	5.92874	FOX{F1,F2,J1}.p2	BC031143|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	NM_028093|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AY364442|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AK008590|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8
mm9_v1_chr11_+_29640992_29641009	5.90531	FOX{F1,F2,J1}.p2	AK206171|Rtn4|68585|reticulon 4
mm9_v1_chr16_-_92400226_92400324	5.88176	FOX{F1,F2,J1}.p2	AF237790|Rcan1|54720|regulator of calcineurin 1	AF263239|Rcan1|54720|regulator of calcineurin 1	BC013551|Rcan1|54720|regulator of calcineurin 1	AK077283|Rcan1|54720|regulator of calcineurin 1	NM_019466|Rcan1|54720|regulator of calcineurin 1
mm9_v1_chr6_-_25639904_25639979	5.88128	FOX{F1,F2,J1}.p2	NM_010338|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr8_+_122668828_122668828	5.86664	FOX{F1,F2,J1}.p2	BC027126|6430548M08Rik|234797|RIKEN cDNA 6430548M08 gene	NM_001163760|6430548M08Rik|234797|RIKEN cDNA 6430548M08 gene
mm9_v1_chr4_-_42787449_42787524	5.86385	FOX{F1,F2,J1}.p2	AF001980|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC038120|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC025974|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC028747|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AK155924|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_011124|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AK144258|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_001193667|Gm1987|100504362|predicted gene 1987
mm9_v1_chr7_+_116154330_116154341	5.81731	FOX{F1,F2,J1}.p2	AK147700|Tub|22141|tubby candidate gene
mm9_v1_chr19_+_42322063_42322067	5.80838	FOX{F1,F2,J1}.p2	AK016850|Golga7b|71146|golgi autoantigen, golgin subfamily a, 7B	NM_001141983|Golga7b|71146|golgi autoantigen, golgin subfamily a, 7B
mm9_v1_chr16_+_17331463_17331501	5.78105	FOX{F1,F2,J1}.p2	NM_008223|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr16_-_45408997_45409165	5.75897	FOX{F1,F2,J1}.p2	AF004023|Cd200|17470|CD200 antigen	BC019172|Cd200|17470|CD200 antigen	AK009051|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	BC051984|Cd200|17470|CD200 antigen	AK164478|Cd200|17470|CD200 antigen	BC054759|Cd200|17470|CD200 antigen	AK131640|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	AK148308|Cd200|17470|CD200 antigen	NM_010818|Cd200|17470|CD200 antigen
mm9_v1_chr11_-_60166321_60166401	5.74726	FOX{F1,F2,J1}.p2	BC062947|Tom1l2|216810|target of myb1-like 2 (chicken)	BC127266|Tom1l2|216810|target of myb1-like 2 (chicken)	AK054531|Tom1l2|216810|target of myb1-like 2 (chicken)	AK036788|Tom1l2|216810|target of myb1-like 2 (chicken)	AF467887|Tom1l2|216810|target of myb1-like 2 (chicken)	AK043095|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr1_-_137064124_137064257	5.73024	FOX{F1,F2,J1}.p2	AK158275|Gpr37l1|171469|G protein-coupled receptor 37-like 1	NM_134438|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr4_+_53556496_53556552	5.69236	FOX{F1,F2,J1}.p2	BC025941|Slc44a1|100434|solute carrier family 44, member 1
mm9_v1_chr2_+_120802698_120802797	5.65707	FOX{F1,F2,J1}.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr5_-_87335956_87335985	5.63832	FOX{F1,F2,J1}.p2	BC028826|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	NM_153598|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	AK145951|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34
mm9_v1_chr6_-_83781704_83781750	5.63441	FOX{F1,F2,J1}.p2	AK140686|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK159287|Paip2b|232164|poly(A) binding protein interacting protein 2B	NM_146169|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr11_+_69867893_69867970	5.61397	FOX{F1,F2,J1}.p2	BC022106|Asgr1|11889|asialoglycoprotein receptor 1	U09362|Asgr1|11889|asialoglycoprotein receptor 1	BC014779|Asgr1|11889|asialoglycoprotein receptor 1
mm9_v1_chr1_+_75139300_75139429	5.59981	FOX{F1,F2,J1}.p2	AK034667|Fam134a|227298|family with sequence similarity 134, member A	NM_170755|Fam134a|227298|family with sequence similarity 134, member A	AK172093|Fam134a|227298|family with sequence similarity 134, member A	BC070406|Fam134a|227298|family with sequence similarity 134, member A	AK165957|Fam134a|227298|family with sequence similarity 134, member A	AK160400|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chr3_-_137794277_137794364	5.57249	FOX{F1,F2,J1}.p2	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chr2_-_170232008_170232013	5.52522	FOX{F1,F2,J1}.p2	AK008957|Bcas1|76960|breast carcinoma amplified sequence 1	AK031825|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr2_+_22923653_22923769	5.47584	FOX{F1,F2,J1}.p2	NM_001102436|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_028793|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK050450|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC090641|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr9_+_57810230_57810233	5.46452	FOX{F1,F2,J1}.p2	AK019344|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm9_v1_chr2_-_152657392_152657404	5.45039	FOX{F1,F2,J1}.p2	AK150028|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr9_-_30957394_30957461	5.43372	FOX{F1,F2,J1}.p2	
mm9_v1_chr17_+_12571494_12571524	5.42954	FOX{F1,F2,J1}.p2	BC057186|Plg|18815|plasminogen	AK132254|Plg|18815|plasminogen	J04766|Plg|18815|plasminogen	AK040840|Plg|18815|plasminogen
mm9_v1_chr4_+_42231042_42231117	5.40995	FOX{F1,F2,J1}.p2	NM_001193667|Gm1987|100504362|predicted gene 1987	AK144258|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	NM_011124|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AK155924|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC025974|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC028747|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	BC038120|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)	AF001980|Ccl21a|18829|chemokine (C-C motif) ligand 21A (serine)
mm9_v1_chr18_+_37105758_37105860	5.40317	FOX{F1,F2,J1}.p2	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr8_-_70434808_70434844	5.38546	FOX{F1,F2,J1}.p2	BC052365|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK161498|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_030263|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr7_-_97278443_97278523	5.3482	FOX{F1,F2,J1}.p2	AK019082|2310010J17Rik|78329|RIKEN cDNA 2310010J17 gene
mm9_v1_chr7_-_4796261_4796301	5.33319	FOX{F1,F2,J1}.p2	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr14_-_104243379_104243389	5.32304	FOX{F1,F2,J1}.p2	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr8_+_26960094_26960127	5.32182	FOX{F1,F2,J1}.p2	NM_008432|Kcnu1|16532|potassium channel, subfamily U, member 1	AF039213|Kcnu1|16532|potassium channel, subfamily U, member 1
mm9_v1_chr2_-_148701108_148701112	5.31033	FOX{F1,F2,J1}.p2	AF311741|Cst3|13010|cystatin C	AF483486|Cst3|13010|cystatin C	AF483487|Cst3|13010|cystatin C
mm9_v1_chr4_+_118199847_118199895	5.27813	FOX{F1,F2,J1}.p2	AK012175|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	NM_025572|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	AK147115|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	AK009128|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene
mm9_v1_chr2_-_173053287_173053316	5.26707	FOX{F1,F2,J1}.p2	AK077382|Pmepa1|65112|prostate transmembrane protein, androgen induced 1
mm9_v1_chr3_+_136333251_136333262	5.26365	FOX{F1,F2,J1}.p2	AK166287|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr10_+_75398317_75398317	5.25363	FOX{F1,F2,J1}.p2	AY238604|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10	NM_175329|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10
mm9_v1_chr12_+_70397751_70397780	5.2395	FOX{F1,F2,J1}.p2	AK009481|Klhdc2|69554|kelch domain containing 2
mm9_v1_chr2_-_152657417_152657458	5.1864	FOX{F1,F2,J1}.p2	BC089016|Bcl2l1|12048|BCL2-like 1	NM_009743|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr12_+_70397723_70397748	5.15405	FOX{F1,F2,J1}.p2	AK051418|Klhdc2|69554|kelch domain containing 2	BC005581|Klhdc2|69554|kelch domain containing 2
mm9_v1_chr7_+_107422781_107422864	5.14759	FOX{F1,F2,J1}.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr11_-_51799215_51799347	5.12537	FOX{F1,F2,J1}.p2	AK190260|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
mm9_v1_chr6_+_71149869_71149892	5.11793	FOX{F1,F2,J1}.p2	AK131868|Fabp1|14080|fatty acid binding protein 1, liver	NM_017399|Fabp1|14080|fatty acid binding protein 1, liver	Y14660|Fabp1|14080|fatty acid binding protein 1, liver	BC009812|Fabp1|14080|fatty acid binding protein 1, liver
mm9_v1_chr7_-_134195490_134195490	5.07742	FOX{F1,F2,J1}.p2	BC031800|Zg16|69036|zymogen granule protein 16	NM_026918|Zg16|69036|zymogen granule protein 16
mm9_v1_chr15_+_18750083_18750083	5.06882	FOX{F1,F2,J1}.p2	AK138606|Cdh10|320873|cadherin 10	NM_009865|Cdh10|320873|cadherin 10
mm9_v1_chr17_-_79135826_79135867	5.0423	FOX{F1,F2,J1}.p2	AJ223777|Strn|268980|striatin, calmodulin binding protein	BC150727|Strn|268980|striatin, calmodulin binding protein
mm9_v1_chr6_+_8898613_8898694	5.04113	FOX{F1,F2,J1}.p2	AK083014|Nxph1|18231|neurexophilin 1
mm9_v1_chr12_-_104895307_104895340	5.03469	FOX{F1,F2,J1}.p2	AK145842|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chrX_+_133371611_133371673	4.99891	FOX{F1,F2,J1}.p2	AK199492|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr3_-_82853711_82853734	4.96278	FOX{F1,F2,J1}.p2	BC031715|Fgb|110135|fibrinogen beta chain	NM_181849|Fgb|110135|fibrinogen beta chain	AK168626|Fgb|110135|fibrinogen beta chain	AK011920|Fgb|110135|fibrinogen beta chain	AK011118|Fgb|110135|fibrinogen beta chain	AK146960|Fgb|110135|fibrinogen beta chain
mm9_v1_chr18_-_67708826_67708826	4.93765	FOX{F1,F2,J1}.p2	BC058320|Spire1|68166|spire homolog 1 (Drosophila)	NM_176832|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr7_+_120909625_120909653	4.92501	FOX{F1,F2,J1}.p2	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr9_-_101154160_101154163	4.9147	FOX{F1,F2,J1}.p2	NM_001161362|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr11_-_97879685_97879687	4.91101	FOX{F1,F2,J1}.p2	AK036404|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit	NM_001159320|Cacnb1|12295|calcium channel, voltage-dependent, beta 1 subunit
mm9_v1_chr6_-_83781657_83781701	4.89865	FOX{F1,F2,J1}.p2	BC017133|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC034096|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC039969|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK173114|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK168804|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK045922|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr1_-_170085342_170085390	4.84846	FOX{F1,F2,J1}.p2	AK083616|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr11_+_98603186_98603266	4.81505	FOX{F1,F2,J1}.p2	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chrX_-_72823345_72823551	4.81455	FOX{F1,F2,J1}.p2	AB232636|Rab39b|67790|RAB39B, member RAS oncogene family	BC052472|Rab39b|67790|RAB39B, member RAS oncogene family	AK039013|Rab39b|67790|RAB39B, member RAS oncogene family	AK048981|Rab39b|67790|RAB39B, member RAS oncogene family	AK160737|Rab39b|67790|RAB39B, member RAS oncogene family	NM_175122|Rab39b|67790|RAB39B, member RAS oncogene family	AK018257|Rab39b|67790|RAB39B, member RAS oncogene family	AK020665|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr2_-_73150559_73150757	4.81392	FOX{F1,F2,J1}.p2	AK006260|Cir1|66935|corepressor interacting with RBPJ, 1	BC061077|Cir1|66935|corepressor interacting with RBPJ, 1	BC094283|Cir1|66935|corepressor interacting with RBPJ, 1	BC089602|Cir1|66935|corepressor interacting with RBPJ, 1	AK008242|Cir1|66935|corepressor interacting with RBPJ, 1	BC099444|Cir1|66935|corepressor interacting with RBPJ, 1	AK131674|Cir1|66935|corepressor interacting with RBPJ, 1	NM_025854|Cir1|66935|corepressor interacting with RBPJ, 1	BC012219|Cir1|66935|corepressor interacting with RBPJ, 1
mm9_v1_chr6_-_92517359_92517359	4.79117	FOX{F1,F2,J1}.p2	BC050793|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134461|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr4_+_134479542_134479573	4.79095	FOX{F1,F2,J1}.p2	BC002142|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC045256|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC051556|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC032060|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC043057|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AB041555|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK152736|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC054728|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr17_-_12868607_12868703	4.77161	FOX{F1,F2,J1}.p2	BC021651|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1	NM_009202|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1
mm9_v1_chr9_+_75862772_75862821	4.75537	FOX{F1,F2,J1}.p2	BC037381|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	NM_173731|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK141622|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK164164|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm9_v1_chr16_-_22439642_22439745	4.72291	FOX{F1,F2,J1}.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chrX_+_63902456_63902492	4.70557	FOX{F1,F2,J1}.p2	NM_001161431|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr2_-_170253324_170253344	4.68639	FOX{F1,F2,J1}.p2	BC113166|Bcas1|76960|breast carcinoma amplified sequence 1	BC113957|Bcas1|76960|breast carcinoma amplified sequence 1	AY219233|Bcas1|76960|breast carcinoma amplified sequence 1	AK020254|Bcas1|76960|breast carcinoma amplified sequence 1	NM_001164369|Bcas1|76960|breast carcinoma amplified sequence 1	NM_029815|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr16_-_30550622_30550663	4.66936	FOX{F1,F2,J1}.p2	AK031524|Tmem44|224090|transmembrane protein 44	AK045675|Tmem44|224090|transmembrane protein 44	AK048655|Tmem44|224090|transmembrane protein 44	NM_172614|Tmem44|224090|transmembrane protein 44
mm9_v1_chr11_-_70053281_70053355	4.65246	FOX{F1,F2,J1}.p2	BC021602|Rnasek|52898|ribonuclease, RNase K	BC021603|Rnasek|52898|ribonuclease, RNase K	AK018709|Rnasek|52898|ribonuclease, RNase K	AK171975|Rnasek|52898|ribonuclease, RNase K	BC024417|Rnasek|52898|ribonuclease, RNase K	AK003548|Rnasek|52898|ribonuclease, RNase K	AK009592|Rnasek|52898|ribonuclease, RNase K	NM_173742|Rnasek|52898|ribonuclease, RNase K
mm9_v1_chr8_-_55804030_55804031	4.62066	FOX{F1,F2,J1}.p2	NM_028220|Wdr17|244484|WD repeat domain 17	BC028268|Wdr17|244484|WD repeat domain 17
mm9_v1_chr12_-_73171976_73172111	4.60498	FOX{F1,F2,J1}.p2	BC114990|Gpr135|238252|G protein-coupled receptor 135	BC115824|Gpr135|238252|G protein-coupled receptor 135	AY288425|Gpr135|238252|G protein-coupled receptor 135	BC148305|Gpr135|238252|G protein-coupled receptor 135	NM_181752|Gpr135|238252|G protein-coupled receptor 135	BC062104|Gpr135|238252|G protein-coupled receptor 135	BC139332|Gpr135|238252|G protein-coupled receptor 135	BC139335|Gpr135|238252|G protein-coupled receptor 135	AK141053|Gpr135|238252|G protein-coupled receptor 135	AK132237|Gpr135|238252|G protein-coupled receptor 135
mm9_v1_chr7_+_140175699_140175731	4.58712	FOX{F1,F2,J1}.p2	AJ250693|Zranb1|360216|zinc finger, RAN-binding domain containing 1
mm9_v1_chr12_+_4134152_4134180	4.57161	FOX{F1,F2,J1}.p2	NM_138305|Adcy3|104111|adenylate cyclase 3	AF458089|Adcy3|104111|adenylate cyclase 3
mm9_v1_chr11_+_3931731_3931881	4.57004	FOX{F1,F2,J1}.p2	BC026948|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	NM_146013|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	AK028954|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)
mm9_v1_chr17_-_24670527_24670832	4.56534	FOX{F1,F2,J1}.p2	AB232621|Rab26|328778|RAB26, member RAS oncogene family	BC094931|Rab26|328778|RAB26, member RAS oncogene family	AK043912|Rab26|328778|RAB26, member RAS oncogene family	AK080607|Rab26|328778|RAB26, member RAS oncogene family	NM_177375|Rab26|328778|RAB26, member RAS oncogene family	BC118018|Rab26|328778|RAB26, member RAS oncogene family
mm9_v1_chrX_-_96665980_96666083	4.53953	FOX{F1,F2,J1}.p2	AK005373|Pja1|18744|praja1, RING-H2 motif containing	BC037616|Pja1|18744|praja1, RING-H2 motif containing	AK181060|Pja1|18744|praja1, RING-H2 motif containing	AK181628|Pja1|18744|praja1, RING-H2 motif containing	AK188149|Pja1|18744|praja1, RING-H2 motif containing	BC025975|Pja1|18744|praja1, RING-H2 motif containing	AK145943|Pja1|18744|praja1, RING-H2 motif containing	AF335250|Pja1|18744|praja1, RING-H2 motif containing	AF335251|Pja1|18744|praja1, RING-H2 motif containing	AF335252|Pja1|18744|praja1, RING-H2 motif containing	AK135382|Pja1|18744|praja1, RING-H2 motif containing	NM_001083110|Pja1|18744|praja1, RING-H2 motif containing	NM_008853|Pja1|18744|praja1, RING-H2 motif containing
mm9_v1_chr7_-_53371419_53371532	4.51972	FOX{F1,F2,J1}.p2	AK085812|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
mm9_v1_chr17_-_12868558_12868577	4.51549	FOX{F1,F2,J1}.p2	U38652|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1	AF010259|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1
mm9_v1_chr4_+_134479504_134479540	4.49049	FOX{F1,F2,J1}.p2	AK028145|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK003799|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK012363|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150024|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK160993|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169598|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169760|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	NM_023665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK029529|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr12_+_99866348_99866525	4.48617	FOX{F1,F2,J1}.p2	AK036359|Spata7|104871|spermatogenesis associated 7	AK169473|Spata7|104871|spermatogenesis associated 7	AK045704|Spata7|104871|spermatogenesis associated 7	AK153698|Spata7|104871|spermatogenesis associated 7	BC046960|Spata7|104871|spermatogenesis associated 7	NM_178914|Spata7|104871|spermatogenesis associated 7	AK161308|Spata7|104871|spermatogenesis associated 7	AK077500|Spata7|104871|spermatogenesis associated 7	DQ196101|Spata7|104871|spermatogenesis associated 7
mm9_v1_chr7_+_19868009_19868016	4.48484	FOX{F1,F2,J1}.p2	AK144271|Rtn2|20167|reticulon 2 (Z-band associated protein)	BC031370|Rtn2|20167|reticulon 2 (Z-band associated protein)	NM_013648|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038538|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr7_-_20283542_20283606	4.48032	FOX{F1,F2,J1}.p2	CT010212|Apoe|11816|apolipoprotein E	CT010356|Apoe|11816|apolipoprotein E	M12414|Apoe|11816|apolipoprotein E
mm9_v1_chr9_-_101101334_101101402	4.46363	FOX{F1,F2,J1}.p2	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr11_-_58615400_58615517	4.46071	FOX{F1,F2,J1}.p2	FJ468008|Fam183b|75429|family with sequence similarity 183, member B	BC094630|Fam183b|75429|family with sequence similarity 183, member B	BC061254|Fam183b|75429|family with sequence similarity 183, member B	BC048748|Fam183b|75429|family with sequence similarity 183, member B	AK157972|Fam183b|75429|family with sequence similarity 183, member B	AK013920|Fam183b|75429|family with sequence similarity 183, member B	NM_001162878|Fam183b|75429|family with sequence similarity 183, member B	NM_029283|Fam183b|75429|family with sequence similarity 183, member B	BC126964|Fam183b|75429|family with sequence similarity 183, member B	BC117741|Fam183b|75429|family with sequence similarity 183, member B
mm9_v1_chr16_+_43619057_43619100	4.44523	FOX{F1,F2,J1}.p2	AK178854|Zbtb20|56490|zinc finger and BTB domain containing 20	AK013698|Zbtb20|56490|zinc finger and BTB domain containing 20	AK036125|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr17_-_34880784_34880841	4.43613	FOX{F1,F2,J1}.p2	BC158005|C4b|12268|complement component 4B (Childo blood group)	BC150743|C4b|12268|complement component 4B (Childo blood group)	BC039141|C4b|12268|complement component 4B (Childo blood group)	BC067394|C4b|12268|complement component 4B (Childo blood group)	BC067409|C4b|12268|complement component 4B (Childo blood group)	BC055297|C4b|12268|complement component 4B (Childo blood group)	AK172637|C4b|12268|complement component 4B (Childo blood group)	AK157954|C4b|12268|complement component 4B (Childo blood group)	AK158256|C4b|12268|complement component 4B (Childo blood group)	AK158475|C4b|12268|complement component 4B (Childo blood group)	AK171644|C4b|12268|complement component 4B (Childo blood group)	M11729|C4b|12268|complement component 4B (Childo blood group)	NM_009780|C4b|12268|complement component 4B (Childo blood group)
mm9_v1_chr11_-_6171453_6171670	4.42132	FOX{F1,F2,J1}.p2	AK003613|Tmed4|103694|transmembrane emp24 protein transport domain containing 4
mm9_v1_chr11_-_86807135_86807208	4.41953	FOX{F1,F2,J1}.p2	BC121190|Ypel2|77864|yippee-like 2 (Drosophila)	AK089126|Ypel2|77864|yippee-like 2 (Drosophila)	AK021387|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr14_-_65671577_65671651	4.34962	FOX{F1,F2,J1}.p2	BC038525|Extl3|54616|exostoses (multiple)-like 3
mm9_v1_chr15_-_54751515_54751700	4.31594	FOX{F1,F2,J1}.p2	EU131009|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	EU131010|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_001136077|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC003264|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AF123542|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK088491|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK161144|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK163881|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC058759|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK038940|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_015744|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr10_+_126921038_126921212	4.29721	FOX{F1,F2,J1}.p2	BC023826|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr8_+_61390551_61390637	4.28971	FOX{F1,F2,J1}.p2	BC030500|BC030500|234290|cDNA sequence BC030500	NM_173411|BC030500|234290|cDNA sequence BC030500
mm9_v1_chr11_-_100259048_100259060	4.28274	FOX{F1,F2,J1}.p2	BC040757|Jup|16480|junction plakoglobin	NM_010593|Jup|16480|junction plakoglobin	BC094461|Jup|16480|junction plakoglobin
mm9_v1_chr17_-_37160241_37160342	4.28091	FOX{F1,F2,J1}.p2	AK013504|Mog|17441|myelin oligodendrocyte glycoprotein	NM_010814|Mog|17441|myelin oligodendrocyte glycoprotein
mm9_v1_chr6_-_58974400_58974495	4.27964	FOX{F1,F2,J1}.p2	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chr2_-_127618207_127618237	4.27507	FOX{F1,F2,J1}.p2	AK165423|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC048556|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK008527|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK027942|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC116797|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC116799|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK005218|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene
mm9_v1_chr7_-_149558139_149558173	4.18735	FOX{F1,F2,J1}.p2	BC049666|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK045822|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK163573|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	NM_177265|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK031961|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene
mm9_v1_chr6_-_5143755_5143945	4.15514	FOX{F1,F2,J1}.p2	BC012706|Pon1|18979|paraoxonase 1	U72636|Pon1|18979|paraoxonase 1	U32684|Pon1|18979|paraoxonase 1	NM_011134|Pon1|18979|paraoxonase 1
mm9_v1_chr2_+_28303460_28303460	4.14365	FOX{F1,F2,J1}.p2	BC070440|Gm347|241289|predicted gene 347	NM_001005420|Gm347|241289|predicted gene 347
mm9_v1_chr12_-_104895293_104895303	4.12448	FOX{F1,F2,J1}.p2	BC013632|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr11_-_50024275_50024312	4.12022	FOX{F1,F2,J1}.p2	U57413|Sqstm1|18412|sequestosome 1	NM_011018|Sqstm1|18412|sequestosome 1	U40930|Sqstm1|18412|sequestosome 1
mm9_v1_chr19_-_5799376_5799434	4.10906	FOX{F1,F2,J1}.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr1_-_94348610_94348663	4.10654	FOX{F1,F2,J1}.p2	AK203226|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
mm9_v1_chr16_+_5884885_5884885	4.07395	FOX{F1,F2,J1}.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr7_+_88907810_88907869	4.06966	FOX{F1,F2,J1}.p2	AK169392|Fam103a1|67148|family with sequence similarity 103, member A1	AK011881|Fam103a1|67148|family with sequence similarity 103, member A1	NM_025997|Fam103a1|67148|family with sequence similarity 103, member A1	AK018614|Fam103a1|67148|family with sequence similarity 103, member A1	AK160347|Fam103a1|67148|family with sequence similarity 103, member A1	AK085230|Fam103a1|67148|family with sequence similarity 103, member A1	AK081301|Fam103a1|67148|family with sequence similarity 103, member A1
mm9_v1_chr5_+_147196560_147196581	4.0305	FOX{F1,F2,J1}.p2	AK044481|Wasf3|245880|WAS protein family, member 3	BC027038|Wasf3|245880|WAS protein family, member 3	NM_145155|Wasf3|245880|WAS protein family, member 3
mm9_v1_chr1_+_89470601_89470620	4.02364	FOX{F1,F2,J1}.p2	AK145284|Neu2|23956|neuraminidase 2	NM_001160163|Neu2|23956|neuraminidase 2	NM_001160164|Neu2|23956|neuraminidase 2	FJ613504|Neu2|23956|neuraminidase 2
mm9_v1_chr8_-_22235728_22235728	4.01921	FOX{F1,F2,J1}.p2	AY761183|Gm14851|634825|predicted gene 14851	NM_001177482|Gm14851|634825|predicted gene 14851
mm9_v1_chr6_+_5675638_5675910	3.97612	FOX{F1,F2,J1}.p2	AK158589|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	NM_001191023|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	NM_001191025|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	NM_001191026|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	NM_001191027|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	NM_010063|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	AF063229|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	AF063230|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	GU992206|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	GU992207|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1	BC051992|Dync1i1|13426|dynein cytoplasmic 1 intermediate chain 1
mm9_v1_chr6_-_148937854_148937926	3.97336	FOX{F1,F2,J1}.p2	AK143126|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr6_+_7505070_7505199	3.95434	FOX{F1,F2,J1}.p2	D17584|Tac1|21333|tachykinin 1	NM_009311|Tac1|21333|tachykinin 1	BC117081|Tac1|21333|tachykinin 1	BC119122|Tac1|21333|tachykinin 1	BC144737|Tac1|21333|tachykinin 1
mm9_v1_chr16_+_22920486_22920556	3.94943	FOX{F1,F2,J1}.p2	AY138460|Fetub|59083|fetuin beta	BC018341|Fetub|59083|fetuin beta
mm9_v1_chr4_+_104830022_104830255	3.94143	FOX{F1,F2,J1}.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr5_-_99681835_99681949	3.93382	FOX{F1,F2,J1}.p2	AK028756|Rasgef1b|320292|RasGEF domain family, member 1B	BC052726|Rasgef1b|320292|RasGEF domain family, member 1B	AK090085|Rasgef1b|320292|RasGEF domain family, member 1B	AK149812|Rasgef1b|320292|RasGEF domain family, member 1B	AY129963|Rasgef1b|320292|RasGEF domain family, member 1B	BC050858|Rasgef1b|320292|RasGEF domain family, member 1B	NM_145839|Rasgef1b|320292|RasGEF domain family, member 1B	NM_181318|Rasgef1b|320292|RasGEF domain family, member 1B
mm9_v1_chr15_-_74879242_74879259	3.9044	FOX{F1,F2,J1}.p2	AK088782|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	AK143577|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	BC010764|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	NM_010741|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1
mm9_v1_chr4_+_98213324_98213424	3.90248	FOX{F1,F2,J1}.p2	NM_001005787|Inadl|12695|InaD-like (Drosophila)	NM_007704|Inadl|12695|InaD-like (Drosophila)	AF060539|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr7_+_133960398_133960398	3.89986	FOX{F1,F2,J1}.p2	NM_026884|Fam57b|68952|family with sequence similarity 57, member B
mm9_v1_chr16_+_49913305_49913369	3.88349	FOX{F1,F2,J1}.p2	AK050387|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr4_-_75779379_75779379	3.87999	FOX{F1,F2,J1}.p2	AF326559|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AF326560|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_001014288|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chrX_+_140127827_140127856	3.86462	FOX{F1,F2,J1}.p2	AF082297|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195046|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195047|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AJ496262|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AJ496263|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AM943853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AM943854|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr4_-_44053229_44053254	3.85314	FOX{F1,F2,J1}.p2	AK033507|Gne|50798|glucosamine	AK202067|Gne|50798|glucosamine
mm9_v1_chr1_-_99873795_99873812	3.84327	FOX{F1,F2,J1}.p2	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr4_+_134479583_134479637	3.832	FOX{F1,F2,J1}.p2	BC056986|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC046231|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr7_-_54175214_54175352	3.80068	FOX{F1,F2,J1}.p2	AK185554|Tsg101|22088|tumor susceptibility gene 101	AK179695|Tsg101|22088|tumor susceptibility gene 101	AK014049|Tsg101|22088|tumor susceptibility gene 101	U52945|Tsg101|22088|tumor susceptibility gene 101	BC085308|Tsg101|22088|tumor susceptibility gene 101	AK146602|Tsg101|22088|tumor susceptibility gene 101	NM_021884|Tsg101|22088|tumor susceptibility gene 101	BC005424|Tsg101|22088|tumor susceptibility gene 101	AK146229|Tsg101|22088|tumor susceptibility gene 101	AK150369|Tsg101|22088|tumor susceptibility gene 101
mm9_v1_chrX_+_160578411_160578593	3.78526	FOX{F1,F2,J1}.p2	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr12_+_39510297_39510297	3.76149	FOX{F1,F2,J1}.p2	AK032224|Etv1|14009|ets variant gene 1	NM_001163154|Etv1|14009|ets variant gene 1
mm9_v1_chr17_-_34960292_34960410	3.75938	FOX{F1,F2,J1}.p2	M12384|C4a|625018|complement component 4A (Rodgers blood group)	BC141050|C4a|625018|complement component 4A (Rodgers blood group)	M21576|C4a|625018|complement component 4A (Rodgers blood group)	NM_011413|C4a|625018|complement component 4A (Rodgers blood group)	AK129017|C4a|625018|complement component 4A (Rodgers blood group)
mm9_v1_chr4_+_126291095_126291164	3.75653	FOX{F1,F2,J1}.p2	AK033039|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene
mm9_v1_chr2_+_91570249_91570297	3.7516	FOX{F1,F2,J1}.p2	NM_001080754|Ambra1|228361|autophagy/beclin 1 regulator 1	NM_172669|Ambra1|228361|autophagy/beclin 1 regulator 1
mm9_v1_chr10_+_68996455_68996596	3.72371	FOX{F1,F2,J1}.p2	NM_146005|Ank3|11735|ankyrin 3, epithelial	NM_170688|Ank3|11735|ankyrin 3, epithelial	NM_170689|Ank3|11735|ankyrin 3, epithelial	NM_170690|Ank3|11735|ankyrin 3, epithelial	NM_170728|Ank3|11735|ankyrin 3, epithelial	NM_170729|Ank3|11735|ankyrin 3, epithelial	NM_170730|Ank3|11735|ankyrin 3, epithelial	AK162547|Ank3|11735|ankyrin 3, epithelial	AK042330|Ank3|11735|ankyrin 3, epithelial	BC021657|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr2_+_76244603_76244617	3.72015	FOX{F1,F2,J1}.p2	AK037703|Osbpl6|99031|oxysterol binding protein-like 6	AK157944|Osbpl6|99031|oxysterol binding protein-like 6	AK220498|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr2_+_19579607_19579745	3.69356	FOX{F1,F2,J1}.p2	NM_027715|Otud1|71198|OTU domain containing 1
mm9_v1_chr9_+_45214037_45214172	3.68223	FOX{F1,F2,J1}.p2	AY626243|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	AY626245|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	AK002228|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	NM_007503|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	BC024614|Fxyd2|11936|FXYD domain-containing ion transport regulator 2	AK002215|Fxyd2|11936|FXYD domain-containing ion transport regulator 2
mm9_v1_chr8_+_3515373_3515441	3.64967	FOX{F1,F2,J1}.p2	AF173829|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_001122818|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_015801|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK040720|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC054789|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC056999|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr7_+_30644997_30645134	3.61287	FOX{F1,F2,J1}.p2	NM_172740|Zfp420|233058|zinc finger protein 420	AK029387|Zfp420|233058|zinc finger protein 420	AK045435|Zfp420|233058|zinc finger protein 420	BC050249|Zfp420|233058|zinc finger protein 420	BC055817|Zfp420|233058|zinc finger protein 420	AK045821|Zfp420|233058|zinc finger protein 420
mm9_v1_chr4_-_118081793_118081882	3.60412	FOX{F1,F2,J1}.p2	GU433214|Szt2|230676|seizure threshold 2	FJ998170|Szt2|230676|seizure threshold 2	NM_198170|Szt2|230676|seizure threshold 2
mm9_v1_chr19_-_29122186_29122463	3.59878	FOX{F1,F2,J1}.p2	AB020203|Ak3|56248|adenylate kinase 3	AK031631|Ak3|56248|adenylate kinase 3	BC024871|Ak3|56248|adenylate kinase 3	NM_021299|Ak3|56248|adenylate kinase 3	BC016432|Ak3|56248|adenylate kinase 3	AK004864|Ak3|56248|adenylate kinase 3	AK008681|Ak3|56248|adenylate kinase 3	BC058191|Ak3|56248|adenylate kinase 3	BC019174|Ak3|56248|adenylate kinase 3	AK007618|Ak3|56248|adenylate kinase 3	AK089027|Ak3|56248|adenylate kinase 3	AK005194|Ak3|56248|adenylate kinase 3	AK149996|Ak3|56248|adenylate kinase 3	AK053644|Ak3|56248|adenylate kinase 3	AK147060|Ak3|56248|adenylate kinase 3
mm9_v1_chr1_+_45390415_45390462	3.55254	FOX{F1,F2,J1}.p2	BC039923|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr8_+_96335202_96335227	3.54672	FOX{F1,F2,J1}.p2	M36778|Gnao1|14681|guanine nucleotide binding protein, alpha O	M36777|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr8_-_22814073_22814118	3.54009	FOX{F1,F2,J1}.p2	AY761184|AY761184|382000|cDNA sequence AY761184	AK008498|AY761184|382000|cDNA sequence AY761184	NM_001007582|AY761184|382000|cDNA sequence AY761184
mm9_v1_chr15_-_82624668_82624681	3.51774	FOX{F1,F2,J1}.p2	AK004915|Cyp2d26|76279|cytochrome P450, family 2, subfamily d, polypeptide 26	NM_029562|Cyp2d26|76279|cytochrome P450, family 2, subfamily d, polypeptide 26
mm9_v1_chr9_+_31923720_31923720	3.48725	FOX{F1,F2,J1}.p2	NM_001195632|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr3_-_113126814_113126969	3.42307	FOX{F1,F2,J1}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr11_+_19879583_19879598	3.41656	FOX{F1,F2,J1}.p2	
mm9_v1_chr2_+_22924846_22924986	3.39985	FOX{F1,F2,J1}.p2	AK005001|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC061484|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr18_+_25224729_25224737	3.3995	FOX{F1,F2,J1}.p2	BC060607|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr15_+_81745348_81745391	3.39529	FOX{F1,F2,J1}.p2	AK196458|Aco2|11429|aconitase 2, mitochondrial	AK198224|Aco2|11429|aconitase 2, mitochondrial	AK208429|Aco2|11429|aconitase 2, mitochondrial
mm9_v1_chr1_+_40738460_40738469	3.38407	FOX{F1,F2,J1}.p2	AK077026|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm9_v1_chr8_-_46467524_46467644	3.36615	FOX{F1,F2,J1}.p2	BC035537|Fam149a|212326|family with sequence similarity 149, member A	AK141607|Fam149a|212326|family with sequence similarity 149, member A	AK140440|Fam149a|212326|family with sequence similarity 149, member A	NM_153535|Fam149a|212326|family with sequence similarity 149, member A
mm9_v1_chr2_-_23904343_23904369	3.35071	FOX{F1,F2,J1}.p2	AB444950|Hnmt|140483|histamine N-methyltransferase	AB444951|Hnmt|140483|histamine N-methyltransferase	AK160131|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr6_-_5446277_5446311	3.33424	FOX{F1,F2,J1}.p2	AJ001418|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	NM_013743|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	BC026134|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK004543|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK036818|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4
mm9_v1_chr4_+_57907600_57907648	3.3324	FOX{F1,F2,J1}.p2	BC034188|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr7_-_151627653_151627692	3.32797	FOX{F1,F2,J1}.p2	AK180662|Cttn|13043|cortactin	AK185163|Cttn|13043|cortactin	AK207194|Cttn|13043|cortactin
mm9_v1_chr8_-_96622710_96622710	3.32708	FOX{F1,F2,J1}.p2	AF342737|Bbs2|67378|Bardet-Biedl syndrome 2 (human)	NM_026116|Bbs2|67378|Bardet-Biedl syndrome 2 (human)
mm9_v1_chr5_-_147032932_147033023	3.32165	FOX{F1,F2,J1}.p2	AY039004|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK049503|Rnf6|74132|ring finger protein (C3H2C3 type) 6	BC138545|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK004745|Rnf6|74132|ring finger protein (C3H2C3 type) 6	NM_028774|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chr14_+_3224445_3224445	3.29728	FOX{F1,F2,J1}.p2	AK085928|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene	NM_177135|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene
mm9_v1_chr14_-_11285927_11285966	3.29359	FOX{F1,F2,J1}.p2	BC012662|Fhit|14198|fragile histidine triad gene
mm9_v1_chr9_-_39411199_39411208	3.28953	FOX{F1,F2,J1}.p2	AK028282|AW551984|244810|expressed sequence AW551984	AK082321|AW551984|244810|expressed sequence AW551984
mm9_v1_chr16_-_22657283_22657317	3.26482	FOX{F1,F2,J1}.p2	AK083258|Dgkg|110197|diacylglycerol kinase, gamma	NM_138650|Dgkg|110197|diacylglycerol kinase, gamma
mm9_v1_chr18_-_16966954_16967033	3.25551	FOX{F1,F2,J1}.p2	AK087418|Cdh2|12558|cadherin 2	BC022107|Cdh2|12558|cadherin 2	AK032826|Cdh2|12558|cadherin 2
mm9_v1_chr7_-_51920870_51920872	3.24038	FOX{F1,F2,J1}.p2	AY205605|Myh14|71960|myosin, heavy polypeptide 14	EF602040|Myh14|71960|myosin, heavy polypeptide 14	NM_028021|Myh14|71960|myosin, heavy polypeptide 14
mm9_v1_chr1_+_53370483_53370609	3.23058	FOX{F1,F2,J1}.p2	BC030671|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	BC058172|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK045669|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	NM_028091|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK137332|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK011265|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1	AK137402|Osgepl1|72085|O-sialoglycoprotein endopeptidase-like 1
mm9_v1_chr5_+_121098830_121098830	3.21517	FOX{F1,F2,J1}.p2	BC005418|Rasal1|19415|RAS protein activator like 1 (GAP1 like)	NM_013832|Rasal1|19415|RAS protein activator like 1 (GAP1 like)
mm9_v1_chr6_+_143156520_143156614	3.18172	FOX{F1,F2,J1}.p2	AK004338|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr14_-_65059694_65059876	3.17393	FOX{F1,F2,J1}.p2	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr16_-_29378636_29378817	3.1737	FOX{F1,F2,J1}.p2	AK158355|Atp13a5|268878|ATPase type 13A5	BC115739|Atp13a5|268878|ATPase type 13A5	AK083102|Atp13a5|268878|ATPase type 13A5	AK083121|Atp13a5|268878|ATPase type 13A5	NM_175650|Atp13a5|268878|ATPase type 13A5
mm9_v1_chr9_-_108499855_108499944	3.15134	FOX{F1,F2,J1}.p2	AK016685|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK161992|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK038927|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK047714|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	BC111871|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	NM_028944|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK046783|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
mm9_v1_chr15_+_88919467_88919574	3.13149	FOX{F1,F2,J1}.p2	BC141293|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK088096|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK054432|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK161059|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK005048|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	BC117817|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	BC117818|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	NM_027905|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene
mm9_v1_chr9_+_107838164_107838328	3.12086	FOX{F1,F2,J1}.p2	AK085143|Camkv|235604|CaM kinase-like vesicle-associated	NM_145621|Camkv|235604|CaM kinase-like vesicle-associated	BC017634|Camkv|235604|CaM kinase-like vesicle-associated	BC111033|Camkv|235604|CaM kinase-like vesicle-associated	AK147323|Camkv|235604|CaM kinase-like vesicle-associated	BC022169|Camkv|235604|CaM kinase-like vesicle-associated	BC086762|Camkv|235604|CaM kinase-like vesicle-associated
mm9_v1_chr3_-_107820766_107820890	3.1149	FOX{F1,F2,J1}.p2	J04632|Gstm1|14862|glutathione S-transferase, mu 1	NM_010358|Gstm1|14862|glutathione S-transferase, mu 1
mm9_v1_chr3_-_113094211_113094366	3.11278	FOX{F1,F2,J1}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr15_-_102008126_102008145	3.10222	FOX{F1,F2,J1}.p2	
mm9_v1_chr7_-_149246757_149246816	3.0856	FOX{F1,F2,J1}.p2	AK158674|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene
mm9_v1_chr11_+_97702591_97702632	3.08523	FOX{F1,F2,J1}.p2	AK081899|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK140210|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK042827|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK031146|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK035650|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK018341|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK080808|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK082773|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene
mm9_v1_chr1_-_132558108_132558210	3.08387	FOX{F1,F2,J1}.p2	AK136735|C4bp|12269|complement component 4 binding protein	AK162345|C4bp|12269|complement component 4 binding protein	AB094486|C4bp|12269|complement component 4 binding protein	AK149477|C4bp|12269|complement component 4 binding protein	BC012257|C4bp|12269|complement component 4 binding protein	AB094485|C4bp|12269|complement component 4 binding protein	NM_007576|C4bp|12269|complement component 4 binding protein	AK050344|C4bp|12269|complement component 4 binding protein	AK149468|C4bp|12269|complement component 4 binding protein	M17122|C4bp|12269|complement component 4 binding protein
mm9_v1_chr1_+_181598319_181598619	3.07769	FOX{F1,F2,J1}.p2	AK086448|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK046033|Sccpdh|109232|saccharopine dehydrogenase (putative)	NM_178653|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK086632|Sccpdh|109232|saccharopine dehydrogenase (putative)	BC025803|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK046468|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK145399|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK081021|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK077695|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK050554|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK166018|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK042919|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK082803|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK182882|Sccpdh|109232|saccharopine dehydrogenase (putative)	AK215316|Sccpdh|109232|saccharopine dehydrogenase (putative)
mm9_v1_chr4_-_36665923_36665995	3.06515	FOX{F1,F2,J1}.p2	BC090619|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166000|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chr14_-_104243474_104243491	3.06292	FOX{F1,F2,J1}.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr14_+_120696834_120696895	3.06184	FOX{F1,F2,J1}.p2	AK167479|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr15_-_82624638_82624663	3.04598	FOX{F1,F2,J1}.p2	BC023241|Cyp2d26|76279|cytochrome P450, family 2, subfamily d, polypeptide 26
mm9_v1_chr11_-_86807216_86807263	3.03476	FOX{F1,F2,J1}.p2	NM_001005341|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr19_+_25107619_25107625	3.02611	FOX{F1,F2,J1}.p2	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr18_+_37874471_37874595	3.0192	FOX{F1,F2,J1}.p2	AK034910|Pcdhga7|93715|protocadherin gamma subfamily A, 7	BC077712|Pcdhga7|93715|protocadherin gamma subfamily A, 7	NM_033590|Pcdhga7|93715|protocadherin gamma subfamily A, 7	AY013801|Pcdhga7|93715|protocadherin gamma subfamily A, 7
mm9_v1_chr10_-_41023009_41023070	3.0079	FOX{F1,F2,J1}.p2	AK169881|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK172341|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK172130|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK155392|Fig4|103199|FIG4 homolog (S. cerevisiae)	BC031887|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK041196|Fig4|103199|FIG4 homolog (S. cerevisiae)	BC015295|Fig4|103199|FIG4 homolog (S. cerevisiae)	NM_133999|Fig4|103199|FIG4 homolog (S. cerevisiae)
mm9_v1_chr19_-_41151561_41151602	3.00494	FOX{F1,F2,J1}.p2	BC060980|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	AK140031|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	NM_153520|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein
mm9_v1_chr5_-_54098762_54098942	3.00356	FOX{F1,F2,J1}.p2	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr2_-_155479292_155479385	2.95481	FOX{F1,F2,J1}.p2	BC003931|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein
mm9_v1_chr12_+_111879117_111879122	2.95053	FOX{F1,F2,J1}.p2	AK122249|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1
mm9_v1_chr9_+_110235922_110235986	2.94825	FOX{F1,F2,J1}.p2	AK035432|Scap|235623|SREBF chaperone
mm9_v1_chr7_+_74367429_74367537	2.93037	FOX{F1,F2,J1}.p2	AK015716|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	NM_175215|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK172203|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK033681|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	BC030310|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK039294|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK143241|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	NM_001191051|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	BC094328|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4
mm9_v1_chr16_-_21787906_21787931	2.92046	FOX{F1,F2,J1}.p2	NM_023737|Ehhadh|74147|enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
mm9_v1_chr1_-_38878059_38878110	2.9173	FOX{F1,F2,J1}.p2	NM_001029878|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2	BC139127|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2	BC139130|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2
mm9_v1_chr2_+_76244578_76244594	2.90591	FOX{F1,F2,J1}.p2	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr15_-_76853069_76853216	2.90028	FOX{F1,F2,J1}.p2	AK137456|Mb|17189|myoglobin	NM_001164048|Mb|17189|myoglobin	NM_001164047|Mb|17189|myoglobin
mm9_v1_chr10_+_13686174_13686209	2.89428	FOX{F1,F2,J1}.p2	AK147244|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147348|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147655|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	NM_010437|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr2_+_25513471_25513587	2.88209	FOX{F1,F2,J1}.p2	AK136629|Lcn5|13863|lipocalin 5	AK021014|Lcn5|13863|lipocalin 5	AK162355|Lcn5|13863|lipocalin 5	NM_001042630|Lcn5|13863|lipocalin 5	NM_007947|Lcn5|13863|lipocalin 5	U68546|Lcn5|13863|lipocalin 5
mm9_v1_chr10_-_80522871_80522963	2.8723	FOX{F1,F2,J1}.p2	AK039966|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	BC003836|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	NM_024499|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK051005|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK079168|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK165557|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm9_v1_chr11_+_121068956_121069016	2.87099	FOX{F1,F2,J1}.p2	NM_001146073|Hexdc|238023|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	FM204885|Hexdc|238023|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	FM204886|Hexdc|238023|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	BC069960|Hexdc|238023|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
mm9_v1_chr17_+_6138147_6138147	2.864	FOX{F1,F2,J1}.p2	AK173165|Tulp4|68842|tubby like protein 4	NM_054040|Tulp4|68842|tubby like protein 4
mm9_v1_chr16_-_35769389_35769480	2.83382	FOX{F1,F2,J1}.p2	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr7_+_116154373_116154494	2.81101	FOX{F1,F2,J1}.p2	AK165720|Tub|22141|tubby candidate gene	NM_021885|Tub|22141|tubby candidate gene	U52433|Tub|22141|tubby candidate gene	BC096554|Tub|22141|tubby candidate gene	U54643|Tub|22141|tubby candidate gene
mm9_v1_chr9_+_21400165_21400200	2.80965	FOX{F1,F2,J1}.p2	
mm9_v1_chr6_+_116600624_116600775	2.80516	FOX{F1,F2,J1}.p2	AK078806|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	AK087284|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	NM_001166580|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	NM_145980|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC031533|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC022212|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC058515|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	AB024924|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene
mm9_v1_chr19_-_45857958_45858012	2.79898	FOX{F1,F2,J1}.p2	AK129188|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr2_+_148221069_148221097	2.77637	FOX{F1,F2,J1}.p2	AK051189|Sstr4|20608|somatostatin receptor 4
mm9_v1_chr12_+_117724182_117724212	2.77002	FOX{F1,F2,J1}.p2	NM_011215|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	AK081267|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	AK138655|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	BC048570|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2
mm9_v1_chr2_-_84614976_84615011	2.76397	FOX{F1,F2,J1}.p2	AK165744|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AK144292|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr2_-_69180643_69180677	2.75641	FOX{F1,F2,J1}.p2	AF133903|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	AK144553|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_021022|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11
mm9_v1_chr2_+_180701920_180701946	2.75169	FOX{F1,F2,J1}.p2	NM_001177707|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177708|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177709|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177710|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_145760|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK145879|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chrX_+_93651684_93651766	2.74995	FOX{F1,F2,J1}.p2	NM_001159627|Heph|15203|hephaestin	NM_181273|Heph|15203|hephaestin	AK081330|Heph|15203|hephaestin	AK129194|Heph|15203|hephaestin	AK032895|Heph|15203|hephaestin	AK086923|Heph|15203|hephaestin
mm9_v1_chr11_-_100259061_100259098	2.745	FOX{F1,F2,J1}.p2	AK170934|Jup|16480|junction plakoglobin	AK171501|Jup|16480|junction plakoglobin	AK145895|Jup|16480|junction plakoglobin
mm9_v1_chr8_-_22466673_22466698	2.74064	FOX{F1,F2,J1}.p2	BC117042|Defa-rs1|13218|defensin, alpha, related sequence 1	BC117044|Defa-rs1|13218|defensin, alpha, related sequence 1	M33226|Defa-rs1|13218|defensin, alpha, related sequence 1	BC145556|Defa-rs1|13218|defensin, alpha, related sequence 1	BC171966|Defa-rs1|13218|defensin, alpha, related sequence 1	AK008584|Defa-rs1|13218|defensin, alpha, related sequence 1	NM_007844|Defa-rs1|13218|defensin, alpha, related sequence 1
mm9_v1_chr6_-_71094313_71094369	2.72813	FOX{F1,F2,J1}.p2	BC025604|Thnsl2|232078|threonine synthase-like 2 (bacterial)	BC051244|Thnsl2|232078|threonine synthase-like 2 (bacterial)	AK165463|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_001033929|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_178413|Thnsl2|232078|threonine synthase-like 2 (bacterial)
mm9_v1_chr19_-_9162377_9162448	2.72353	FOX{F1,F2,J1}.p2	BC027518|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	AK145844|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	NM_011681|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)
mm9_v1_chr7_+_19876447_19876478	2.72115	FOX{F1,F2,J1}.p2	NM_001025364|Rtn2|20167|reticulon 2 (Z-band associated protein)	AK160500|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038539|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr1_+_94803538_94803618	2.71382	FOX{F1,F2,J1}.p2	AK163560|Dusp28|67446|dual specificity phosphatase 28	AK002934|Dusp28|67446|dual specificity phosphatase 28	NM_175118|Dusp28|67446|dual specificity phosphatase 28	BC119127|Dusp28|67446|dual specificity phosphatase 28	BC051598|Dusp28|67446|dual specificity phosphatase 28	AK088940|Dusp28|67446|dual specificity phosphatase 28
mm9_v1_chr1_+_51345952_51345993	2.6968	FOX{F1,F2,J1}.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr9_+_43875175_43875249	2.68485	FOX{F1,F2,J1}.p2	AY255638|Usp2|53376|ubiquitin specific peptidase 2	AY255639|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr17_-_46462714_46462714	2.68302	FOX{F1,F2,J1}.p2	AF406642|Abcc10|224814|ATP-binding cassette, sub-family C (CFTR/MRP), member 10	NM_145140|Abcc10|224814|ATP-binding cassette, sub-family C (CFTR/MRP), member 10
mm9_v1_chr2_+_164312023_164312078	2.67831	FOX{F1,F2,J1}.p2	BC019947|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	AY187289|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr19_+_39135495_39135572	2.67305	FOX{F1,F2,J1}.p2	NM_028191|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	AY227733|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC051089|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC118514|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC117531|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	AK008688|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65
mm9_v1_chr5_-_114541313_114541402	2.6686	FOX{F1,F2,J1}.p2	BC059878|Svop|68666|SV2 related protein	AK047655|Svop|68666|SV2 related protein	AK053833|Svop|68666|SV2 related protein	AK160770|Svop|68666|SV2 related protein	AK047764|Svop|68666|SV2 related protein	AK082744|Svop|68666|SV2 related protein	NM_026805|Svop|68666|SV2 related protein
mm9_v1_chr15_-_82184631_82184726	2.66255	FOX{F1,F2,J1}.p2	AK002749|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK010988|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK012328|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	BC048451|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	NM_025987|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)
mm9_v1_chr4_-_141381906_141381921	2.6601	FOX{F1,F2,J1}.p2	BC026552|Cela2a|13706|chymotrypsin-like elastase family, member 2A	NM_007919|Cela2a|13706|chymotrypsin-like elastase family, member 2A	X04573|Cela2a|13706|chymotrypsin-like elastase family, member 2A
mm9_v1_chr11_-_102417457_102417523	2.64907	FOX{F1,F2,J1}.p2	AK135410|Gpatch8|237943|G patch domain containing 8	NM_001159492|Gpatch8|237943|G patch domain containing 8
mm9_v1_chr1_+_137635977_137636035	2.63818	FOX{F1,F2,J1}.p2	CT010278|Csrp1|13007|cysteine and glycine-rich protein 1
mm9_v1_chr5_-_44485951_44486006	2.62821	FOX{F1,F2,J1}.p2	AF305215|Prom1|19126|prominin 1	AY099088|Prom1|19126|prominin 1	AY223521|Prom1|19126|prominin 1	AY223522|Prom1|19126|prominin 1	NM_001163578|Prom1|19126|prominin 1	NM_001163581|Prom1|19126|prominin 1	NM_001163582|Prom1|19126|prominin 1	NM_001163583|Prom1|19126|prominin 1	NM_001163584|Prom1|19126|prominin 1	NM_001163585|Prom1|19126|prominin 1
mm9_v1_chr18_+_37911236_37911432	2.62087	FOX{F1,F2,J1}.p2	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr10_+_19949600_19949600	2.61457	FOX{F1,F2,J1}.p2	AK008018|Mtap7|17761|microtubule-associated protein 7	NM_001198636|Mtap7|17761|microtubule-associated protein 7
mm9_v1_chr10_-_17954752_17954810	2.61297	FOX{F1,F2,J1}.p2	AK028075|Ccdc28a|215814|coiled-coil domain containing 28A	BC013553|Ccdc28a|215814|coiled-coil domain containing 28A	BC027759|Ccdc28a|215814|coiled-coil domain containing 28A	AK148447|Ccdc28a|215814|coiled-coil domain containing 28A	NM_144820|Ccdc28a|215814|coiled-coil domain containing 28A
mm9_v1_chr11_-_72016872_72016872	2.5924	FOX{F1,F2,J1}.p2	BC043106|4933427D14Rik|74477|RIKEN cDNA 4933427D14 gene	NM_028963|4933427D14Rik|74477|RIKEN cDNA 4933427D14 gene
mm9_v1_chr19_+_23215817_23215902	2.58642	FOX{F1,F2,J1}.p2	BC138724|Klf9|16601|Kruppel-like factor 9	BC138725|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr8_-_37631772_37631789	2.57879	FOX{F1,F2,J1}.p2	BC048730|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr5_-_77543903_77543908	2.56447	FOX{F1,F2,J1}.p2	AK004798|Hopx|74318|HOP homeobox	AK009007|Hopx|74318|HOP homeobox
mm9_v1_chr16_+_35002066_35002125	2.53384	FOX{F1,F2,J1}.p2	BC062265|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr9_-_15105965_15105999	2.52988	FOX{F1,F2,J1}.p2	BC016078|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	NM_133732|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr19_-_7292086_7292113	2.51786	FOX{F1,F2,J1}.p2	NM_007750|Cox8a|12868|cytochrome c oxidase, subunit VIIIa
mm9_v1_chr17_+_78599556_78599594	2.50804	FOX{F1,F2,J1}.p2	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr11_-_60166405_60166439	2.50599	FOX{F1,F2,J1}.p2	AK166040|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039092|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039093|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_153080|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr5_+_136455974_136455989	2.50514	FOX{F1,F2,J1}.p2	BC100745|Zp3|22788|zona pellucida glycoprotein 3	BC103583|Zp3|22788|zona pellucida glycoprotein 3	BC103584|Zp3|22788|zona pellucida glycoprotein 3	BC103585|Zp3|22788|zona pellucida glycoprotein 3	M20026|Zp3|22788|zona pellucida glycoprotein 3	NM_011776|Zp3|22788|zona pellucida glycoprotein 3	AK131934|Zp3|22788|zona pellucida glycoprotein 3	BC099465|Zp3|22788|zona pellucida glycoprotein 3
mm9_v1_chr7_-_52230117_52230178	2.50219	FOX{F1,F2,J1}.p2	AF320000|Cpt1c|78070|carnitine palmitoyltransferase 1c	NM_153679|Cpt1c|78070|carnitine palmitoyltransferase 1c	BC066155|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr11_-_51449228_51449289	2.49891	FOX{F1,F2,J1}.p2	BC016075|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr14_+_120830603_120830641	2.48963	FOX{F1,F2,J1}.p2	AK003316|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr9_+_43875103_43875168	2.487	FOX{F1,F2,J1}.p2	NM_198092|Usp2|53376|ubiquitin specific peptidase 2	AK138799|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr10_-_75931585_75931614	2.48219	FOX{F1,F2,J1}.p2	AK037727|Ybey|216119|ybeY metallopeptidase	AK051909|Ybey|216119|ybeY metallopeptidase	AK136543|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr6_-_38787222_38787309	2.4683	FOX{F1,F2,J1}.p2	AF208292|Hipk2|15258|homeodomain interacting protein kinase 2	NM_001136065|Hipk2|15258|homeodomain interacting protein kinase 2	AK016742|Hipk2|15258|homeodomain interacting protein kinase 2
mm9_v1_chr4_+_9196439_9196508	2.46827	FOX{F1,F2,J1}.p2	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chr11_+_101902822_101902904	2.46143	FOX{F1,F2,J1}.p2	NM_001160711|Cd300lg|52685|CD300 antigen like family member G	NM_001160712|Cd300lg|52685|CD300 antigen like family member G	NM_001160713|Cd300lg|52685|CD300 antigen like family member G	NM_027987|Cd300lg|52685|CD300 antigen like family member G	AB243063|Cd300lg|52685|CD300 antigen like family member G	AB243064|Cd300lg|52685|CD300 antigen like family member G	AB243065|Cd300lg|52685|CD300 antigen like family member G	AB243066|Cd300lg|52685|CD300 antigen like family member G	AK009375|Cd300lg|52685|CD300 antigen like family member G	BC116906|Cd300lg|52685|CD300 antigen like family member G	BC119315|Cd300lg|52685|CD300 antigen like family member G	AK171982|Cd300lg|52685|CD300 antigen like family member G	AK138920|Cd300lg|52685|CD300 antigen like family member G	AY457055|Cd300lg|52685|CD300 antigen like family member G
mm9_v1_chr2_-_91284827_91284865	2.44585	FOX{F1,F2,J1}.p2	AK018339|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC049648|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr2_+_91570304_91570382	2.43662	FOX{F1,F2,J1}.p2	AK148887|Ambra1|228361|autophagy/beclin 1 regulator 1	AK084557|Ambra1|228361|autophagy/beclin 1 regulator 1	AK155513|Ambra1|228361|autophagy/beclin 1 regulator 1	AK037516|Ambra1|228361|autophagy/beclin 1 regulator 1	AK083596|Ambra1|228361|autophagy/beclin 1 regulator 1	AK169280|Ambra1|228361|autophagy/beclin 1 regulator 1	BC054082|Ambra1|228361|autophagy/beclin 1 regulator 1	BC032293|Ambra1|228361|autophagy/beclin 1 regulator 1
mm9_v1_chr16_-_22657245_22657273	2.42623	FOX{F1,F2,J1}.p2	AK220294|Dgkg|110197|diacylglycerol kinase, gamma	AK087972|Dgkg|110197|diacylglycerol kinase, gamma	AK085470|Dgkg|110197|diacylglycerol kinase, gamma
mm9_v1_chr7_-_13007839_13007937	2.41326	FOX{F1,F2,J1}.p2	AK137311|Zfp551|619331|zinc fingr protein 551	NM_001033820|Zfp551|619331|zinc fingr protein 551	BC141160|Zfp551|619331|zinc fingr protein 551	BC145466|Zfp551|619331|zinc fingr protein 551
mm9_v1_chr2_+_180701948_180701963	2.41013	FOX{F1,F2,J1}.p2	AK168007|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK168602|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr9_+_106091656_106091698	2.40447	FOX{F1,F2,J1}.p2	BC054453|Wdr82|77305|WD repeat domain containing 82	BC112907|Wdr82|77305|WD repeat domain containing 82	BC044669|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr2_+_174167172_174167173	2.40318	FOX{F1,F2,J1}.p2	BC048834|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr11_+_78332692_78332747	2.39991	FOX{F1,F2,J1}.p2	
mm9_v1_chr4_+_102242664_102242699	2.39542	FOX{F1,F2,J1}.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr2_+_91386476_91386497	2.3935	FOX{F1,F2,J1}.p2	BC017140|Ckap5|75786|cytoskeleton associated protein 5	BC089032|Ckap5|75786|cytoskeleton associated protein 5	NM_001165989|Ckap5|75786|cytoskeleton associated protein 5	NM_029437|Ckap5|75786|cytoskeleton associated protein 5	BC138334|Ckap5|75786|cytoskeleton associated protein 5	BC096422|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr10_-_82153323_82153394	2.38979	FOX{F1,F2,J1}.p2	BC082561|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK040842|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK086276|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK136351|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK003894|Glt8d2|74782|glycosyltransferase 8 domain containing 2	NM_029102|Glt8d2|74782|glycosyltransferase 8 domain containing 2
mm9_v1_chr4_+_97439255_97439362	2.38858	FOX{F1,F2,J1}.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr5_+_135526788_135526925	2.38627	FOX{F1,F2,J1}.p2	
mm9_v1_chr11_+_82724754_82724832	2.36147	FOX{F1,F2,J1}.p2	NM_178680|Unc45b|217012|unc-45 homolog B (C. elegans)	AK084418|Unc45b|217012|unc-45 homolog B (C. elegans)	AK168968|Unc45b|217012|unc-45 homolog B (C. elegans)	AK081821|Unc45b|217012|unc-45 homolog B (C. elegans)	AK169274|Unc45b|217012|unc-45 homolog B (C. elegans)	AK052294|Unc45b|217012|unc-45 homolog B (C. elegans)	BC084585|Unc45b|217012|unc-45 homolog B (C. elegans)
mm9_v1_chr19_+_23215725_23215754	2.34957	FOX{F1,F2,J1}.p2	BC106117|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr13_-_21545556_21545633	2.33962	FOX{F1,F2,J1}.p2	AK156196|Zfp187|432731|zinc finger protein 187	NM_001013786|Zfp187|432731|zinc finger protein 187
mm9_v1_chr15_-_78299035_78299081	2.31621	FOX{F1,F2,J1}.p2	BC057674|Tmprss6|71753|transmembrane serine protease 6	AY240929|Tmprss6|71753|transmembrane serine protease 6	BC029645|Tmprss6|71753|transmembrane serine protease 6	NM_027902|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr11_+_78006893_78006893	2.31235	FOX{F1,F2,J1}.p2	AK160258|Proca1|216974|protein interacting with cyclin A1	NM_001045516|Proca1|216974|protein interacting with cyclin A1
mm9_v1_chr2_+_22924699_22924786	2.2997	FOX{F1,F2,J1}.p2	BC084584|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr8_+_124254462_124254503	2.29491	FOX{F1,F2,J1}.p2	AB024449|Jph3|57340|junctophilin 3	NM_020605|Jph3|57340|junctophilin 3	AK046136|Jph3|57340|junctophilin 3	AK082880|Jph3|57340|junctophilin 3	AK045706|Jph3|57340|junctophilin 3	BC103682|Jph3|57340|junctophilin 3	BC104736|Jph3|57340|junctophilin 3	BC105307|Jph3|57340|junctophilin 3
mm9_v1_chr17_-_46817717_46817797	2.27317	FOX{F1,F2,J1}.p2	AJ278127|Klhdc3|71765|kelch domain containing 3	AK170623|Klhdc3|71765|kelch domain containing 3	AB053465|Klhdc3|71765|kelch domain containing 3	AK079082|Klhdc3|71765|kelch domain containing 3
mm9_v1_chr2_+_151398367_151398403	2.26788	FOX{F1,F2,J1}.p2	BC005556|Sdcbp2|228765|syndecan binding protein (syntenin) 2	NM_145535|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK144452|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK160483|Sdcbp2|228765|syndecan binding protein (syntenin) 2	AK136572|Sdcbp2|228765|syndecan binding protein (syntenin) 2
mm9_v1_chr7_-_133521447_133521447	2.2617	FOX{F1,F2,J1}.p2	NM_023712|Spns1|73658|spinster homolog 1 (Drosophila)
mm9_v1_chr18_+_37885359_37885546	2.24135	FOX{F1,F2,J1}.p2	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr14_-_31304341_31304341	2.22551	FOX{F1,F2,J1}.p2	AJ437292|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_028981|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr1_+_97210162_97210393	2.2226	FOX{F1,F2,J1}.p2	BC021428|Fam174a|67698|family with sequence similarity 174, member A	AK084861|Fam174a|67698|family with sequence similarity 174, member A	NM_026321|Fam174a|67698|family with sequence similarity 174, member A	AK009797|Fam174a|67698|family with sequence similarity 174, member A	AK017318|Fam174a|67698|family with sequence similarity 174, member A	AK009892|Fam174a|67698|family with sequence similarity 174, member A	AK020633|Fam174a|67698|family with sequence similarity 174, member A	AK148807|Fam174a|67698|family with sequence similarity 174, member A	AK033948|Fam174a|67698|family with sequence similarity 174, member A	AB154249|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr7_-_149246905_149246979	2.21982	FOX{F1,F2,J1}.p2	AK135483|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	BC037588|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	AF228503|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	NM_028308|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene	AK012535|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene
mm9_v1_chr14_-_19071459_19071620	2.21452	FOX{F1,F2,J1}.p2	BC096461|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK079075|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK054522|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	U12142|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	NM_011584|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2
mm9_v1_chr17_-_24769539_24769566	2.20199	FOX{F1,F2,J1}.p2	AK147487|Tsc2|22084|tuberous sclerosis 2	AK171007|Tsc2|22084|tuberous sclerosis 2	U39818|Tsc2|22084|tuberous sclerosis 2	AK147016|Tsc2|22084|tuberous sclerosis 2	BC052449|Tsc2|22084|tuberous sclerosis 2	BC060701|Tsc2|22084|tuberous sclerosis 2	AK190188|Tsc2|22084|tuberous sclerosis 2	AK170589|Tsc2|22084|tuberous sclerosis 2	AK148062|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr18_+_35000283_35000409	2.19455	FOX{F1,F2,J1}.p2	BC020184|Reep2|225362|receptor accessory protein 2	NM_144865|Reep2|225362|receptor accessory protein 2	AK147333|Reep2|225362|receptor accessory protein 2	AY562230|Reep2|225362|receptor accessory protein 2	EU555417|Reep2|225362|receptor accessory protein 2
mm9_v1_chr3_+_82830071_82830096	2.1907	FOX{F1,F2,J1}.p2	NM_001111048|Fga|14161|fibrinogen alpha chain	NM_010196|Fga|14161|fibrinogen alpha chain	AK146828|Fga|14161|fibrinogen alpha chain	BC005467|Fga|14161|fibrinogen alpha chain	BC024778|Fga|14161|fibrinogen alpha chain
mm9_v1_chrX_+_45976916_45976963	2.172	FOX{F1,F2,J1}.p2	AK051145|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AK148277|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr12_+_105625371_105625401	2.16895	FOX{F1,F2,J1}.p2	NM_009253|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M	BC053337|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M	X55148|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M
mm9_v1_chr15_-_36700634_36700638	2.1535	FOX{F1,F2,J1}.p2	AK003664|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr1_-_46910333_46910455	2.15009	FOX{F1,F2,J1}.p2	BC062918|Slc39a10|227059|solute carrier family 39 (zinc transporter), member 10	NM_172653|Slc39a10|227059|solute carrier family 39 (zinc transporter), member 10	BC052880|Slc39a10|227059|solute carrier family 39 (zinc transporter), member 10
mm9_v1_chr5_+_139899132_139899277	2.14957	FOX{F1,F2,J1}.p2	AK030375|Gpr30|76854|G protein-coupled receptor 30	NM_029771|Gpr30|76854|G protein-coupled receptor 30	AK018203|Gpr30|76854|G protein-coupled receptor 30	BC138598|Gpr30|76854|G protein-coupled receptor 30	BC138616|Gpr30|76854|G protein-coupled receptor 30
mm9_v1_chr5_+_143105467_143105567	2.08997	FOX{F1,F2,J1}.p2	AK010881|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK043857|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK155113|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	BC044894|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	NM_178398|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK169051|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2	AK172030|Wipi2|74781|WD repeat domain, phosphoinositide interacting 2
mm9_v1_chr3_+_138078450_138078473	2.07472	FOX{F1,F2,J1}.p2	AK132994|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_011996|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	AJ245750|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100729|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100736|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100730|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide
mm9_v1_chr16_+_43321404_43321450	2.07257	FOX{F1,F2,J1}.p2	
mm9_v1_chr6_-_71390592_71390638	2.06342	FOX{F1,F2,J1}.p2	AK164384|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	NM_024288|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr9_-_39411708_39411856	2.0623	FOX{F1,F2,J1}.p2	AK049098|AW551984|244810|expressed sequence AW551984	NM_178737|AW551984|244810|expressed sequence AW551984	BC061211|AW551984|244810|expressed sequence AW551984
mm9_v1_chr5_-_146531642_146531721	2.05649	FOX{F1,F2,J1}.p2	BC138084|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	BC138083|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	AB033414|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A	NM_017396|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A
mm9_v1_chr15_-_83749802_83749906	2.05597	FOX{F1,F2,J1}.p2	NM_001161629|Efcab6|77627|EF-hand calcium binding domain 6	AK016516|Efcab6|77627|EF-hand calcium binding domain 6
mm9_v1_chr12_+_81216835_81216867	2.04921	FOX{F1,F2,J1}.p2	AK040614|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene	AK005005|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene
mm9_v1_chr3_-_152003317_152003373	2.04657	FOX{F1,F2,J1}.p2	BC138328|Fam73a|215708|family with sequence similarity 73, member A	BC138329|Fam73a|215708|family with sequence similarity 73, member A	AK166051|Fam73a|215708|family with sequence similarity 73, member A	BC059928|Fam73a|215708|family with sequence similarity 73, member A	AK044739|Fam73a|215708|family with sequence similarity 73, member A	BC098205|Fam73a|215708|family with sequence similarity 73, member A	AK045347|Fam73a|215708|family with sequence similarity 73, member A	AK143366|Fam73a|215708|family with sequence similarity 73, member A	AK085017|Fam73a|215708|family with sequence similarity 73, member A	NM_001162375|Fam73a|215708|family with sequence similarity 73, member A	NM_174868|Fam73a|215708|family with sequence similarity 73, member A
mm9_v1_chr2_+_180701966_180702005	2.04612	FOX{F1,F2,J1}.p2	BC027794|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC016228|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030295|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AJ401461|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC052922|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK089321|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK052985|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK134402|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC059817|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030520|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177706|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr13_+_23962141_23962200	2.02946	FOX{F1,F2,J1}.p2	NM_001170638|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	NM_009198|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AF361761|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AK164712|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	X77241|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	BC013445|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1
mm9_v1_chr11_-_98590680_98590748	2.01019	FOX{F1,F2,J1}.p2	AF126543|Med24|23989|mediator complex subunit 24	AK193218|Med24|23989|mediator complex subunit 24	AK020269|Med24|23989|mediator complex subunit 24	AK154618|Med24|23989|mediator complex subunit 24	AK158385|Med24|23989|mediator complex subunit 24	NM_011869|Med24|23989|mediator complex subunit 24
mm9_v1_chr12_+_4850202_4850209	2.00808	FOX{F1,F2,J1}.p2	AK170427|BC068281|238037|cDNA sequence BC068281
mm9_v1_chr16_+_38742446_38742523	2.00463	FOX{F1,F2,J1}.p2	AK041692|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK136637|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr5_-_29704731_29704866	1.99448	FOX{F1,F2,J1}.p2	AF190665|Lmbr1|56873|limb region 1	AF190666|Lmbr1|56873|limb region 1	BC016110|Lmbr1|56873|limb region 1	AK030631|Lmbr1|56873|limb region 1
mm9_v1_chr10_+_127848744_127848813	1.98416	FOX{F1,F2,J1}.p2	AK031657|Rnf41|67588|ring finger protein 41	AK034551|Rnf41|67588|ring finger protein 41	AK044103|Rnf41|67588|ring finger protein 41	AK032848|Rnf41|67588|ring finger protein 41	AK028551|Rnf41|67588|ring finger protein 41	AK077466|Rnf41|67588|ring finger protein 41
mm9_v1_chr3_-_103541882_103541927	1.98174	FOX{F1,F2,J1}.p2	AK002518|Olfml3|99543|olfactomedin-like 3	AK131879|Olfml3|99543|olfactomedin-like 3	AK076084|Olfml3|99543|olfactomedin-like 3	AK143728|Olfml3|99543|olfactomedin-like 3	NM_133859|Olfml3|99543|olfactomedin-like 3
mm9_v1_chr6_-_134847832_134848056	1.97909	FOX{F1,F2,J1}.p2	NM_001167695|Gpr19|14760|G protein-coupled receptor 19	NM_001167696|Gpr19|14760|G protein-coupled receptor 19	BC021648|Gpr19|14760|G protein-coupled receptor 19	AK132917|Gpr19|14760|G protein-coupled receptor 19	AK140770|Gpr19|14760|G protein-coupled receptor 19	AK160688|Gpr19|14760|G protein-coupled receptor 19	NM_001167693|Gpr19|14760|G protein-coupled receptor 19	NM_001167694|Gpr19|14760|G protein-coupled receptor 19	NM_001167700|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr15_+_81702875_81703029	1.97319	FOX{F1,F2,J1}.p2	NM_080633|Aco2|11429|aconitase 2, mitochondrial	AK143917|Aco2|11429|aconitase 2, mitochondrial	AK145511|Aco2|11429|aconitase 2, mitochondrial	AK150027|Aco2|11429|aconitase 2, mitochondrial	AK150954|Aco2|11429|aconitase 2, mitochondrial	AK165411|Aco2|11429|aconitase 2, mitochondrial	BC094462|Aco2|11429|aconitase 2, mitochondrial	AK029122|LOC100504340|100504340|hypothetical protein LOC100504340
mm9_v1_chr18_+_86564229_86564343	1.96931	FOX{F1,F2,J1}.p2	AK081325|Neto1|246317|neuropilin (NRP) and tolloid (TLL)-like 1	NM_144946|Neto1|246317|neuropilin (NRP) and tolloid (TLL)-like 1
mm9_v1_chr7_-_117758395_117758412	1.96922	FOX{F1,F2,J1}.p2	AK173257|Sbf2|319934|SET binding factor 2	AK048952|Sbf2|319934|SET binding factor 2	BC067204|Sbf2|319934|SET binding factor 2
mm9_v1_chr2_+_26436575_26436625	1.96448	FOX{F1,F2,J1}.p2	AK156158|Egfl7|353156|EGF-like domain 7	NM_178444|Egfl7|353156|EGF-like domain 7	AY309459|Egfl7|353156|EGF-like domain 7	AY239289|Egfl7|353156|EGF-like domain 7	AF184973|Egfl7|353156|EGF-like domain 7
mm9_v1_chr2_-_91284778_91284823	1.96392	FOX{F1,F2,J1}.p2	BC089006|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK164320|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC085239|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK045977|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	NM_175123|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC032255|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr18_-_32297813_32297870	1.95635	FOX{F1,F2,J1}.p2	AF318182|Proc|19123|protein C	BC013896|Proc|19123|protein C	NM_001042768|Proc|19123|protein C	NM_008934|Proc|19123|protein C
mm9_v1_chr17_-_46281016_46281172	1.94851	FOX{F1,F2,J1}.p2	AK165820|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	BC019423|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	AK006440|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)	NM_029338|Rsph9|75564|radial spoke head 9 homolog (Chlamydomonas)
mm9_v1_chr4_-_115742546_115742551	1.94503	FOX{F1,F2,J1}.p2	AK028137|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr2_+_122012007_122012007	1.91863	FOX{F1,F2,J1}.p2	AK016695|4933406J08Rik|74401|RIKEN cDNA 4933406J08 gene	NM_028914|4933406J08Rik|74401|RIKEN cDNA 4933406J08 gene
mm9_v1_chr19_+_26822892_26822948	1.91453	FOX{F1,F2,J1}.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr11_-_101026888_101026952	1.8905	FOX{F1,F2,J1}.p2	BC024538|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr2_+_138082301_138082378	1.8872	FOX{F1,F2,J1}.p2	NM_001025431|Btbd3|228662|BTB (POZ) domain containing 3	AK052530|Btbd3|228662|BTB (POZ) domain containing 3	AK161924|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr2_+_34262387_34262397	1.88236	FOX{F1,F2,J1}.p2	BC096618|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr10_+_127896244_127896376	1.87692	FOX{F1,F2,J1}.p2	NM_001114096|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001114097|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_198160|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC058720|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK089461|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK170530|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK146971|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC040363|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm9_v1_chr6_+_34813131_34813171	1.87547	FOX{F1,F2,J1}.p2	AK030532|Tmem140|68487|transmembrane protein 140	AK165621|Tmem140|68487|transmembrane protein 140	NM_197986|Tmem140|68487|transmembrane protein 140	BC023802|Tmem140|68487|transmembrane protein 140
mm9_v1_chr17_+_85082489_85082494	1.87314	FOX{F1,F2,J1}.p2	BC138484|Abcg8|67470|ATP-binding cassette, sub-family G (WHITE), member 8	BC145293|Abcg8|67470|ATP-binding cassette, sub-family G (WHITE), member 8
mm9_v1_chr11_+_96902859_96902922	1.87124	FOX{F1,F2,J1}.p2	AK002865|Mrpl10|107732|mitochondrial ribosomal protein L10	NM_026154|Mrpl10|107732|mitochondrial ribosomal protein L10	AK078499|Mrpl10|107732|mitochondrial ribosomal protein L10	AK171028|Mrpl10|107732|mitochondrial ribosomal protein L10	AK007643|Mrpl10|107732|mitochondrial ribosomal protein L10	AK078463|Mrpl10|107732|mitochondrial ribosomal protein L10	AK150774|Mrpl10|107732|mitochondrial ribosomal protein L10	BC016219|Mrpl10|107732|mitochondrial ribosomal protein L10	AK141835|Mrpl10|107732|mitochondrial ribosomal protein L10
mm9_v1_chr5_-_45841351_45841377	1.86999	FOX{F1,F2,J1}.p2	AK161660|Qdpr|110391|quinoid dihydropteridine reductase
mm9_v1_chr9_+_83818720_83818828	1.86973	FOX{F1,F2,J1}.p2	AK089921|Bckdhb|12040|branched chain ketoacid dehydrogenase E1, beta polypeptide	AK156264|Bckdhb|12040|branched chain ketoacid dehydrogenase E1, beta polypeptide	L16992|Bckdhb|12040|branched chain ketoacid dehydrogenase E1, beta polypeptide
mm9_v1_chr2_-_52194317_52194317	1.86225	FOX{F1,F2,J1}.p2	NM_010889|Neb|17996|nebulin
mm9_v1_chr15_+_35301285_35301305	1.85966	FOX{F1,F2,J1}.p2	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr1_-_31006558_31006594	1.85863	FOX{F1,F2,J1}.p2	BC055039|Ptp4a1|19243|protein tyrosine phosphatase 4a1	U84411|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr17_+_19641774_19641774	1.85527	FOX{F1,F2,J1}.p2	NM_001104562|Vmn2r100|627537|vomeronasal 2, receptor 100
mm9_v1_chr1_+_5073161_5073324	1.84648	FOX{F1,F2,J1}.p2	AK151659|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK034165|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK135137|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK152147|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK081492|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	BC009154|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK078767|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	NM_133826|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H
mm9_v1_chr19_-_4007587_4007601	1.84499	FOX{F1,F2,J1}.p2	
mm9_v1_chr15_+_81900546_81900546	1.84079	FOX{F1,F2,J1}.p2	NM_028897|Mei1|74369|meiosis defective 1
mm9_v1_chr4_-_15872497_15872653	1.83731	FOX{F1,F2,J1}.p2	CT010405|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK010473|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK004725|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK168490|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK015692|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK146003|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK002756|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	BC046972|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	NM_026172|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial
mm9_v1_chr11_-_68825972_68825998	1.8355	FOX{F1,F2,J1}.p2	
mm9_v1_chr17_-_46575402_46575425	1.82584	FOX{F1,F2,J1}.p2	BC013474|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK143949|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK082865|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	NM_144856|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr19_+_32694494_32694583	1.82098	FOX{F1,F2,J1}.p2	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr4_+_57867433_57867513	1.81711	FOX{F1,F2,J1}.p2	NM_001035533|Akap2|11641|A kinase (PRKA) anchor protein 2	AK182017|Akap2|11641|A kinase (PRKA) anchor protein 2	AK209944|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr9_+_37015872_37015947	1.81261	FOX{F1,F2,J1}.p2	AK161115|Tmem218|66279|transmembrane protein 218	BC034160|Tmem218|66279|transmembrane protein 218	NM_025464|Tmem218|66279|transmembrane protein 218	AK003010|Tmem218|66279|transmembrane protein 218	AK007575|Tmem218|66279|transmembrane protein 218	AK008902|Tmem218|66279|transmembrane protein 218
mm9_v1_chrX_-_133492517_133492517	1.8068	FOX{F1,F2,J1}.p2	NM_001080967|Tmsb15b2|100034363|thymosin beta 15b2
mm9_v1_chr19_+_7131270_7131299	1.80098	FOX{F1,F2,J1}.p2	AK052998|Macrod1|107227|MACRO domain containing 1
mm9_v1_chrX_+_132806184_132806337	1.79425	FOX{F1,F2,J1}.p2	L10905|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr12_-_77896481_77896489	1.78716	FOX{F1,F2,J1}.p2	BC066825|Gpx2|14776|glutathione peroxidase 2	BC039658|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr2_-_77541328_77541435	1.78432	FOX{F1,F2,J1}.p2	BC048543|Zfp385b|241494|zinc finger protein 385B	NM_001113399|Zfp385b|241494|zinc finger protein 385B	AK047859|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr3_+_133902563_133902608	1.78253	FOX{F1,F2,J1}.p2	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr12_-_77896410_77896435	1.75771	FOX{F1,F2,J1}.p2	BC010823|Gpx2|14776|glutathione peroxidase 2	AK131940|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr8_+_121868362_121868462	1.75501	FOX{F1,F2,J1}.p2	AK050550|Hsbp1|68196|heat shock factor binding protein 1	AK018708|Hsbp1|68196|heat shock factor binding protein 1	AK078498|Hsbp1|68196|heat shock factor binding protein 1	AK145940|Hsbp1|68196|heat shock factor binding protein 1	BC002153|Hsbp1|68196|heat shock factor binding protein 1	NM_024219|Hsbp1|68196|heat shock factor binding protein 1
mm9_v1_chrX_-_133511337_133511364	1.75478	FOX{F1,F2,J1}.p2	BC096054|Tmsb15l|399591|thymosin beta 15b like
mm9_v1_chr1_-_136700174_136700333	1.74618	FOX{F1,F2,J1}.p2	AK051953|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK161046|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr14_+_55506625_55506792	1.7332	FOX{F1,F2,J1}.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr12_+_106944191_106944326	1.73143	FOX{F1,F2,J1}.p2	AK029555|Ak7|78801|adenylate kinase 7	NM_030187|Ak7|78801|adenylate kinase 7	AK019664|Ak7|78801|adenylate kinase 7
mm9_v1_chrX_-_133511388_133511422	1.69424	FOX{F1,F2,J1}.p2	AK029707|Tmsb15l|399591|thymosin beta 15b like	NM_207267|Tmsb15l|399591|thymosin beta 15b like	NM_001081983|Tmsb15b1|666244|thymosin beta 15b1
mm9_v1_chr15_+_88890140_88890179	1.68378	FOX{F1,F2,J1}.p2	NM_001002005|Panx2|406218|pannexin 2	EU446266|Panx2|406218|pannexin 2
mm9_v1_chr13_+_23622912_23622975	1.67732	FOX{F1,F2,J1}.p2	NM_153173|Hist1h4h|69386|histone cluster 1, H4h	AK007642|Hist1h4h|69386|histone cluster 1, H4h	BC087952|Hist1h4h|69386|histone cluster 1, H4h	BC028550|Hist1h4h|69386|histone cluster 1, H4h	BC058529|Hist1h4h|69386|histone cluster 1, H4h
mm9_v1_chr8_-_42127124_42127219	1.66984	FOX{F1,F2,J1}.p2	AF173380|Mtus1|102103|mitochondrial tumor suppressor 1	AF493235|Mtus1|102103|mitochondrial tumor suppressor 1	AK031693|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr9_+_113721698_113721717	1.66208	FOX{F1,F2,J1}.p2	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr12_-_77896534_77896540	1.66086	FOX{F1,F2,J1}.p2	NM_030677|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr3_+_87973934_87974022	1.65504	FOX{F1,F2,J1}.p2	AK032042|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr9_-_50576208_50576266	1.6222	FOX{F1,F2,J1}.p2	AJ250230|1110032A03Rik|68721|RIKEN cDNA 1110032A03 gene	AK166202|1110032A03Rik|68721|RIKEN cDNA 1110032A03 gene	BC032012|1110032A03Rik|68721|RIKEN cDNA 1110032A03 gene	AK158460|1110032A03Rik|68721|RIKEN cDNA 1110032A03 gene	AK043513|1110032A03Rik|68721|RIKEN cDNA 1110032A03 gene	NM_023483|1110032A03Rik|68721|RIKEN cDNA 1110032A03 gene
mm9_v1_chr2_-_90319326_90319330	1.61963	FOX{F1,F2,J1}.p2	D83203|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	NM_001135657|Ptprj|19271|protein tyrosine phosphatase, receptor type, J
mm9_v1_chr13_+_49063750_49063790	1.60636	FOX{F1,F2,J1}.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr9_-_44611033_44611045	1.60495	FOX{F1,F2,J1}.p2	BC024432|Ttc36|192653|tetratricopeptide repeat domain 36	NM_138951|Ttc36|192653|tetratricopeptide repeat domain 36	BC021613|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr11_-_53083217_53083336	1.59075	FOX{F1,F2,J1}.p2	AK180907|Hspa4|15525|heat shock protein 4	AK148883|Hspa4|15525|heat shock protein 4
mm9_v1_chr11_+_53380870_53380943	1.56602	FOX{F1,F2,J1}.p2	AK161223|Kif3a|16568|kinesin family member 3A	NM_008443|Kif3a|16568|kinesin family member 3A	D12645|Kif3a|16568|kinesin family member 3A	AK161920|Kif3a|16568|kinesin family member 3A	AK169425|Kif3a|16568|kinesin family member 3A	BC052707|Kif3a|16568|kinesin family member 3A	BC044720|Kif3a|16568|kinesin family member 3A	AK147078|Kif3a|16568|kinesin family member 3A	BC023936|Kif3a|16568|kinesin family member 3A
mm9_v1_chr11_+_106889431_106889676	1.56189	FOX{F1,F2,J1}.p2	AK007422|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	NM_001163473|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC124997|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC125006|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene
mm9_v1_chr1_+_20720985_20720998	1.54308	FOX{F1,F2,J1}.p2	AK040420|Il17a|16171|interleukin 17A	BC119303|Il17a|16171|interleukin 17A	BC119309|Il17a|16171|interleukin 17A	NM_010552|Il17a|16171|interleukin 17A	U43088|Il17a|16171|interleukin 17A
mm9_v1_chr6_+_141634834_141634916	1.53405	FOX{F1,F2,J1}.p2	
mm9_v1_chr7_+_26696262_26696351	1.52728	FOX{F1,F2,J1}.p2	AF129405|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10
mm9_v1_chr11_-_106642357_106642481	1.52091	FOX{F1,F2,J1}.p2	AK011169|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr3_+_33707638_33707720	1.51252	FOX{F1,F2,J1}.p2	AK016428|Ttc14|67120|tetratricopeptide repeat domain 14	BC103802|Ttc14|67120|tetratricopeptide repeat domain 14
mm9_v1_chr3_-_59014800_59014805	1.5057	FOX{F1,F2,J1}.p2	BC119043|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK008013|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK038560|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK083264|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	NM_028808|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13
mm9_v1_chr11_-_69575192_69575469	1.50049	FOX{F1,F2,J1}.p2	AF016712|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137893|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137894|Amac1|56293|acyl-malonyl condensing enzyme 1	NM_019871|Amac1|56293|acyl-malonyl condensing enzyme 1	AK077181|Amac1|56293|acyl-malonyl condensing enzyme 1
mm9_v1_chr4_-_62131905_62131926	1.48551	FOX{F1,F2,J1}.p2	AF274321|Wdr31|71354|WD repeat domain 31	NM_023597|Wdr31|71354|WD repeat domain 31	BC037102|Wdr31|71354|WD repeat domain 31	AK017259|Wdr31|71354|WD repeat domain 31	AK141026|Wdr31|71354|WD repeat domain 31
mm9_v1_chr17_-_46575337_46575389	1.48507	FOX{F1,F2,J1}.p2	AB069965|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026598|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026597|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC024119|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr5_+_138882703_138882746	1.48385	FOX{F1,F2,J1}.p2	NM_028130|Zfp157|72154|zinc finger protein 157	AK042470|Zfp157|72154|zinc finger protein 157	BC059261|Zfp157|72154|zinc finger protein 157	AK083851|Zfp157|72154|zinc finger protein 157	BC049676|Zfp157|72154|zinc finger protein 157	AK028290|Zfp157|72154|zinc finger protein 157
mm9_v1_chr7_-_4636519_4636597	1.46001	FOX{F1,F2,J1}.p2	AK088469|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	AK013263|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	BC014758|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	NM_024172|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
mm9_v1_chr6_+_41304103_41304177	1.45029	FOX{F1,F2,J1}.p2	BC138698|Try10|436522|trypsin 10	BC146017|Try10|436522|trypsin 10	NM_001038996|Try10|436522|trypsin 10	AK133516|Try10|436522|trypsin 10
mm9_v1_chr7_-_85722668_85722860	1.44977	FOX{F1,F2,J1}.p2	AY336094|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_008746|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_182809|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	BC139764|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035399|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035400|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3
mm9_v1_chr15_+_8918001_8918118	1.44493	FOX{F1,F2,J1}.p2	AK048152|Ranbp3l|223332|RAN binding protein 3-like	AK132406|Ranbp3l|223332|RAN binding protein 3-like	BC058706|Ranbp3l|223332|RAN binding protein 3-like	NM_198024|Ranbp3l|223332|RAN binding protein 3-like
mm9_v1_chr1_-_31006461_31006538	1.44287	FOX{F1,F2,J1}.p2	BC094447|Ptp4a1|19243|protein tyrosine phosphatase 4a1	BC003761|Ptp4a1|19243|protein tyrosine phosphatase 4a1	BC031734|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr8_+_75095914_75096060	1.43739	FOX{F1,F2,J1}.p2	AK157969|Tmem38a|74166|transmembrane protein 38A	AK165818|Tmem38a|74166|transmembrane protein 38A	EF988666|Tmem38a|74166|transmembrane protein 38A	BC014728|Tmem38a|74166|transmembrane protein 38A	AK034868|Nwd1|319555|NACHT and WD repeat domain containing 1	BC024788|Tmem38a|74166|transmembrane protein 38A	NM_144534|Tmem38a|74166|transmembrane protein 38A	AB261158|Tmem38a|74166|transmembrane protein 38A
mm9_v1_chr14_+_76904316_76904371	1.43581	FOX{F1,F2,J1}.p2	AK147039|Tsc22d1|21807|TSC22 domain family, member 1	NM_009366|Tsc22d1|21807|TSC22 domain family, member 1	AK145204|Tsc22d1|21807|TSC22 domain family, member 1	AK135277|Tsc22d1|21807|TSC22 domain family, member 1	AK135282|Tsc22d1|21807|TSC22 domain family, member 1	AK135514|Tsc22d1|21807|TSC22 domain family, member 1	AK148732|Tsc22d1|21807|TSC22 domain family, member 1	X62940|Tsc22d1|21807|TSC22 domain family, member 1	AK179000|Tsc22d1|21807|TSC22 domain family, member 1	BC026703|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr3_+_5218545_5218658	1.43027	FOX{F1,F2,J1}.p2	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr11_+_96891270_96891328	1.42592	FOX{F1,F2,J1}.p2	AK075869|Scrn2|217140|secernin 2	BC021346|Scrn2|217140|secernin 2	BC010784|Scrn2|217140|secernin 2
mm9_v1_chr17_+_3482314_3482460	1.42303	FOX{F1,F2,J1}.p2	AK158489|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr10_+_62849310_62849422	1.41522	FOX{F1,F2,J1}.p2	NM_013888|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AK032207|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AF132906|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC013501|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC071211|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12
mm9_v1_chr13_+_49704471_49704523	1.41443	FOX{F1,F2,J1}.p2	AK075638|Ogn|18295|osteoglycin	AK163772|Ogn|18295|osteoglycin	D31951|Ogn|18295|osteoglycin	BC021939|Ogn|18295|osteoglycin
mm9_v1_chr8_-_22566988_22566988	1.41411	FOX{F1,F2,J1}.p2	NM_001177518|Gm7849|665927|predicted gene 7849	NM_001177526|Gm7861|665956|predicted gene 7861
mm9_v1_chr5_-_100588826_100588826	1.40192	FOX{F1,F2,J1}.p2	BC055321|Tmem150c|231503|transmembrane protein 150C	NM_182841|Tmem150c|231503|transmembrane protein 150C
mm9_v1_chr11_-_102017662_102017746	1.40117	FOX{F1,F2,J1}.p2	AK012106|Tmem101|76547|transmembrane protein 101	AK041154|Tmem101|76547|transmembrane protein 101	BC011109|Tmem101|76547|transmembrane protein 101	AK049378|Tmem101|76547|transmembrane protein 101	AK140260|Tmem101|76547|transmembrane protein 101	NM_029649|Tmem101|76547|transmembrane protein 101
mm9_v1_chr7_+_120909680_120909687	1.39639	FOX{F1,F2,J1}.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr18_-_60432920_60432925	1.38663	FOX{F1,F2,J1}.p2	BC150900|Gm4841|225594|predicted gene 4841	NM_001034859|Gm4841|225594|predicted gene 4841	AK156469|Gm4841|225594|predicted gene 4841
mm9_v1_chr14_+_63754443_63754544	1.38483	FOX{F1,F2,J1}.p2	Y18463|Ctsb|13030|cathepsin B
mm9_v1_chr15_-_79664645_79664773	1.38309	FOX{F1,F2,J1}.p2	BC011199|Cbx6|494448|chromobox homolog 6	BC048240|Cbx6|494448|chromobox homolog 6	AK004679|Cbx6|494448|chromobox homolog 6	AK090253|Cbx6|494448|chromobox homolog 6	AK146048|Cbx6|494448|chromobox homolog 6	AK146103|Cbx6|494448|chromobox homolog 6	AY394488|Npcd|504193|neuronal pentraxin chromo domain	AY394489|Npcd|504193|neuronal pentraxin chromo domain	AY395907|Npcd|504193|neuronal pentraxin chromo domain	AK035250|Cbx6|494448|chromobox homolog 6	NM_001013360|Npcd|504193|neuronal pentraxin chromo domain	NM_001013362|Npcd|504193|neuronal pentraxin chromo domain	NM_028763|Cbx6|494448|chromobox homolog 6
mm9_v1_chr19_-_4121444_4121482	1.37386	FOX{F1,F2,J1}.p2	BC075614|Aip|11632|aryl-hydrocarbon receptor-interacting protein	AK011609|Aip|11632|aryl-hydrocarbon receptor-interacting protein
mm9_v1_chr10_+_127525425_127525449	1.36938	FOX{F1,F2,J1}.p2	AK003460|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr9_-_44610921_44611015	1.36938	FOX{F1,F2,J1}.p2	BC021608|Ttc36|192653|tetratricopeptide repeat domain 36	AK165811|Ttc36|192653|tetratricopeptide repeat domain 36	BC026825|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr15_-_13103346_13103429	1.36468	FOX{F1,F2,J1}.p2	NM_007666|Cdh6|12563|cadherin 6	AK134611|Cdh6|12563|cadherin 6
mm9_v1_chr11_+_96891242_96891268	1.36026	FOX{F1,F2,J1}.p2	NM_146027|Scrn2|217140|secernin 2
mm9_v1_chr19_-_19185685_19185685	1.35622	FOX{F1,F2,J1}.p2	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr11_+_53915017_53915025	1.34957	FOX{F1,F2,J1}.p2	U16163|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
mm9_v1_chr12_+_113209769_113209769	1.34711	FOX{F1,F2,J1}.p2	AB362563|Tdrd9|74691|tudor domain containing 9	NM_029056|Tdrd9|74691|tudor domain containing 9
mm9_v1_chr7_-_116637251_116637251	1.34707	FOX{F1,F2,J1}.p2	AK147559|Trim66|330627|tripartite motif-containing 66	NM_001170913|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr9_+_107790512_107790620	1.34434	FOX{F1,F2,J1}.p2	AK013387|Mon1a|72825|MON1 homolog A (yeast)	BC048852|Mon1a|72825|MON1 homolog A (yeast)	AK172624|Mon1a|72825|MON1 homolog A (yeast)	AK218443|Mon1a|72825|MON1 homolog A (yeast)
mm9_v1_chr11_+_34214821_34214821	1.34273	FOX{F1,F2,J1}.p2	BC072605|Fam196b|574403|family with sequence similarity 196, member B	NM_001025382|Fam196b|574403|family with sequence similarity 196, member B
mm9_v1_chr16_+_38742365_38742408	1.33069	FOX{F1,F2,J1}.p2	AK050005|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	NM_019804|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK052013|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK053603|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK085368|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC031115|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF142672|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF158746|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK045602|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK018658|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC013492|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr17_+_25023618_25023724	1.32758	FOX{F1,F2,J1}.p2	NM_001163750|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	NM_001163751|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	BC072556|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK076170|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK082768|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK220234|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK156579|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3	AK167474|Spsb3|79043|splA/ryanodine receptor domain and SOCS box containing 3
mm9_v1_chr9_-_15105864_15105946	1.32583	FOX{F1,F2,J1}.p2	CT010296|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC011540|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC025213|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr3_-_113159420_113159575	1.32575	FOX{F1,F2,J1}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr9_+_107790457_107790481	1.32412	FOX{F1,F2,J1}.p2	NM_028369|Mon1a|72825|MON1 homolog A (yeast)	BC058717|Mon1a|72825|MON1 homolog A (yeast)
mm9_v1_chr7_+_25055436_25055599	1.32193	FOX{F1,F2,J1}.p2	AK132229|Zfp93|22755|zinc finger protein 93	NM_009567|Zfp93|22755|zinc finger protein 93	U46186|Zfp93|22755|zinc finger protein 93	AK146095|Zfp93|22755|zinc finger protein 93	AK165630|Zfp93|22755|zinc finger protein 93	AK040325|Zfp93|22755|zinc finger protein 93	AK028905|Zfp93|22755|zinc finger protein 93
mm9_v1_chr2_+_24008680_24008706	1.3176	FOX{F1,F2,J1}.p2	AK009787|Il1f8|69677|interleukin 1 family, member 8	BC119517|Il1f8|69677|interleukin 1 family, member 8	NM_027163|Il1f8|69677|interleukin 1 family, member 8	AY071842|Il1f8|69677|interleukin 1 family, member 8
mm9_v1_chr3_+_101266000_101266048	1.31371	FOX{F1,F2,J1}.p2	AK012857|Igsf3|78908|immunoglobulin superfamily, member 3
mm9_v1_chr3_-_95862377_95862377	1.31125	FOX{F1,F2,J1}.p2	NM_013841|Vps45|22365|vacuolar protein sorting 45 (yeast)	U66865|Vps45|22365|vacuolar protein sorting 45 (yeast)
mm9_v1_chr1_-_52784161_52784228	1.29623	FOX{F1,F2,J1}.p2	AK035995|Mfsd6|98682|major facilitator superfamily domain containing 6	NM_133829|Mfsd6|98682|major facilitator superfamily domain containing 6	NM_178081|Mfsd6|98682|major facilitator superfamily domain containing 6	AK171946|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr14_-_60845511_60845640	1.29383	FOX{F1,F2,J1}.p2	AK145818|BC010981|407830|cDNA sequence BC010981
mm9_v1_chr7_-_34987169_34987529	1.28235	FOX{F1,F2,J1}.p2	
mm9_v1_chr8_-_27054528_27054658	1.27613	FOX{F1,F2,J1}.p2	
mm9_v1_chr13_+_4573320_4573394	1.27535	FOX{F1,F2,J1}.p2	AK020439|Akr1c21|77337|aldo-keto reductase family 1, member C21	NM_029901|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC061057|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC013531|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC091761|Akr1c21|77337|aldo-keto reductase family 1, member C21	AB178898|Akr1c21|77337|aldo-keto reductase family 1, member C21	AY742217|Akr1c21|77337|aldo-keto reductase family 1, member C21
mm9_v1_chr1_-_152840432_152840584	1.27281	FOX{F1,F2,J1}.p2	BC147549|Hmcn1|545370|hemicentin 1	BC147568|Hmcn1|545370|hemicentin 1	AK052713|Hmcn1|545370|hemicentin 1	NM_001024720|Hmcn1|545370|hemicentin 1
mm9_v1_chr5_+_31350991_31351042	1.2694	FOX{F1,F2,J1}.p2	NM_027855|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151307|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151366|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC049637|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AB009018|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK002276|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK169267|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC057097|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene
mm9_v1_chr4_-_102699296_102699446	1.25426	FOX{F1,F2,J1}.p2	AF054843|Insl5|23919|insulin-like 5	BC010968|Insl5|23919|insulin-like 5	AF076971|Insl5|23919|insulin-like 5	AF133817|Insl5|23919|insulin-like 5	NM_011831|Insl5|23919|insulin-like 5	AF054842|Insl5|23919|insulin-like 5
mm9_v1_chr11_+_110829346_110829387	1.24386	FOX{F1,F2,J1}.p2	AK078905|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK128942|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	NM_010604|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	BC033442|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16
mm9_v1_chr11_-_96688959_96689060	1.24214	FOX{F1,F2,J1}.p2	BC047283|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AF071084|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	X78709|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr17_-_71339826_71339901	1.23881	FOX{F1,F2,J1}.p2	BC099425|Myl12b|67938|myosin, light chain 12B, regulatory	BC131925|Myl12b|67938|myosin, light chain 12B, regulatory	BC131927|Myl12b|67938|myosin, light chain 12B, regulatory	BC028878|Myl12b|67938|myosin, light chain 12B, regulatory	AK002885|Myl12b|67938|myosin, light chain 12B, regulatory	AK168316|Myl12b|67938|myosin, light chain 12B, regulatory	NM_023402|Myl12b|67938|myosin, light chain 12B, regulatory	AK146115|Myl12b|67938|myosin, light chain 12B, regulatory	AK005133|Myl12b|67938|myosin, light chain 12B, regulatory	AK160123|Myl12b|67938|myosin, light chain 12B, regulatory
mm9_v1_chr11_+_94515080_94515111	1.23736	FOX{F1,F2,J1}.p2	AK143575|Mrpl27|94064|mitochondrial ribosomal protein L27	BC030074|Mrpl27|94064|mitochondrial ribosomal protein L27	NM_053161|Mrpl27|94064|mitochondrial ribosomal protein L27	BC096568|Mrpl27|94064|mitochondrial ribosomal protein L27	AB049648|Mrpl27|94064|mitochondrial ribosomal protein L27	AK080324|Mrpl27|94064|mitochondrial ribosomal protein L27	AK080329|Mrpl27|94064|mitochondrial ribosomal protein L27
mm9_v1_chr12_+_4133370_4133572	1.22703	FOX{F1,F2,J1}.p2	NM_001159536|Adcy3|104111|adenylate cyclase 3	NM_001159537|Adcy3|104111|adenylate cyclase 3	AK122298|Adcy3|104111|adenylate cyclase 3	BC057113|Adcy3|104111|adenylate cyclase 3	BC057316|Adcy3|104111|adenylate cyclase 3
mm9_v1_chr5_-_146345586_146345608	1.22433	FOX{F1,F2,J1}.p2	AB033414|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A	NM_001105159|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	NM_017396|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A
mm9_v1_chr11_-_70458401_70458578	1.21951	FOX{F1,F2,J1}.p2	AK202008|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK213339|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK207630|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK213174|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
mm9_v1_chr8_+_94192087_94192089	1.21708	FOX{F1,F2,J1}.p2	
mm9_v1_chr10_+_127525538_127525558	1.21372	FOX{F1,F2,J1}.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr5_+_144578646_144578690	1.20929	FOX{F1,F2,J1}.p2	NM_013557|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AY033898|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK155206|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	BC028923|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1
mm9_v1_chr5_-_104406333_104406376	1.20463	FOX{F1,F2,J1}.p2	AY101768|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13
mm9_v1_chr6_-_97409251_97409295	1.19715	FOX{F1,F2,J1}.p2	AK129262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr11_+_53914425_53914544	1.17949	FOX{F1,F2,J1}.p2	NM_001136076|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	NM_011031|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK053504|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK142624|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK144124|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK145535|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	BC018411|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
mm9_v1_chr5_-_144670646_144670709	1.16386	FOX{F1,F2,J1}.p2	BC026958|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024410|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC026972|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024480|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_001172146|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_146165|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
mm9_v1_chr6_-_85819035_85819112	1.15179	FOX{F1,F2,J1}.p2	AK050449|Cml2|93673|camello-like 2	AF163315|Cml2|93673|camello-like 2
mm9_v1_chr3_+_103811134_103811169	1.14958	FOX{F1,F2,J1}.p2	
mm9_v1_chr7_+_17545027_17545143	1.14733	FOX{F1,F2,J1}.p2	AK079661|Pnmal1|71691|PNMA-like 1	BC048228|Pnmal1|71691|PNMA-like 1	NM_001007569|Pnmal1|71691|PNMA-like 1
mm9_v1_chr16_+_37887639_37887665	1.14384	FOX{F1,F2,J1}.p2	AK007464|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr7_-_31411089_31411143	1.13979	FOX{F1,F2,J1}.p2	AK018721|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	BC024343|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	AK012686|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1
mm9_v1_chr17_-_80295336_80295462	1.13946	FOX{F1,F2,J1}.p2	AK135988|Atl2|56298|atlastin GTPase 2	BC060501|Atl2|56298|atlastin GTPase 2	NM_019717|Atl2|56298|atlastin GTPase 2	AK038697|Atl2|56298|atlastin GTPase 2	AK043907|Atl2|56298|atlastin GTPase 2	AK008381|Atl2|56298|atlastin GTPase 2	NM_178050|Atl2|56298|atlastin GTPase 2
mm9_v1_chr4_-_106351290_106351290	1.13553	FOX{F1,F2,J1}.p2	AK005923|Ttc4|72354|tetratricopeptide repeat domain 4	NM_001172073|Ttc4|72354|tetratricopeptide repeat domain 4
mm9_v1_chr17_+_46818005_46818130	1.13242	FOX{F1,F2,J1}.p2	AK010863|Mea1|17256|male enhanced antigen 1	AK008305|Mea1|17256|male enhanced antigen 1	AK008194|Mea1|17256|male enhanced antigen 1	AK010904|Mea1|17256|male enhanced antigen 1	AK010962|Mea1|17256|male enhanced antigen 1	AK012617|Mea1|17256|male enhanced antigen 1	AK005369|Mea1|17256|male enhanced antigen 1	AK005106|Mea1|17256|male enhanced antigen 1	L10401|Mea1|17256|male enhanced antigen 1	M27938|Mea1|17256|male enhanced antigen 1	NM_010787|Mea1|17256|male enhanced antigen 1	AK011189|Mea1|17256|male enhanced antigen 1	D17341|Mea1|17256|male enhanced antigen 1
mm9_v1_chr2_-_29904342_29904416	1.13045	FOX{F1,F2,J1}.p2	BC085113|Wdr34|71820|WD repeat domain 34	AK014304|Wdr34|71820|WD repeat domain 34	NM_001008498|Wdr34|71820|WD repeat domain 34
mm9_v1_chr1_+_40738476_40738556	1.12266	FOX{F1,F2,J1}.p2	BC103685|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC104737|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC105676|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	NM_001033289|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm9_v1_chr12_+_77182878_77182935	1.11753	FOX{F1,F2,J1}.p2	FJ848978|Syne2|319565|synaptic nuclear envelope 2
mm9_v1_chr11_+_43247252_43247280	1.11593	FOX{F1,F2,J1}.p2	BC082780|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC025870|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK046262|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK029117|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK049178|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC060954|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr9_+_72833379_72833456	1.10942	FOX{F1,F2,J1}.p2	AK076325|Ccpg1|72278|cell cycle progression 1	AK128894|Ccpg1|72278|cell cycle progression 1	AK148864|Ccpg1|72278|cell cycle progression 1	BC082602|Ccpg1|72278|cell cycle progression 1	BC043049|Ccpg1|72278|cell cycle progression 1	AK007973|Ccpg1|72278|cell cycle progression 1	AK134675|Ccpg1|72278|cell cycle progression 1	AK032645|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr8_+_125748717_125748786	1.10708	FOX{F1,F2,J1}.p2	NM_194444|Cdk10|234854|cyclin-dependent kinase 10	NM_194446|Cdk10|234854|cyclin-dependent kinase 10	DQ288857|Cdk10|234854|cyclin-dependent kinase 10	BC017131|Cdk10|234854|cyclin-dependent kinase 10	AK144801|Cdk10|234854|cyclin-dependent kinase 10	AK170594|Cdk10|234854|cyclin-dependent kinase 10	BC052096|Cdk10|234854|cyclin-dependent kinase 10	BC023736|Cdk10|234854|cyclin-dependent kinase 10	AK133918|Cdk10|234854|cyclin-dependent kinase 10
mm9_v1_chr7_-_31411149_31411184	1.10651	FOX{F1,F2,J1}.p2	AK007996|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	NM_025628|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1
mm9_v1_chr7_+_120909509_120909519	1.10025	FOX{F1,F2,J1}.p2	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr3_+_99966396_99966429	1.0978	FOX{F1,F2,J1}.p2	AK146835|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2	AK082958|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2
mm9_v1_chr16_-_38550174_38550326	1.09315	FOX{F1,F2,J1}.p2	AK197458|Poglut1|224143|protein O-glucosyltransferase 1	AK215456|Poglut1|224143|protein O-glucosyltransferase 1	AK216766|Poglut1|224143|protein O-glucosyltransferase 1	AK036224|Poglut1|224143|protein O-glucosyltransferase 1	NM_172380|Poglut1|224143|protein O-glucosyltransferase 1	AK031608|Poglut1|224143|protein O-glucosyltransferase 1	AK041321|Poglut1|224143|protein O-glucosyltransferase 1	AK045278|Poglut1|224143|protein O-glucosyltransferase 1	AK035948|Poglut1|224143|protein O-glucosyltransferase 1	BC026809|Poglut1|224143|protein O-glucosyltransferase 1	AK082556|Poglut1|224143|protein O-glucosyltransferase 1	AK167641|Poglut1|224143|protein O-glucosyltransferase 1	AK079886|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr7_+_53039273_53039322	1.09156	FOX{F1,F2,J1}.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr9_-_100935259_100935321	1.08908	FOX{F1,F2,J1}.p2	BC026531|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AF327060|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	BC037082|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	BC055946|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK050366|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK004976|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	NM_025835|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK134437|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide
mm9_v1_chr2_+_143741050_143741074	1.08899	FOX{F1,F2,J1}.p2	NM_019771|Dstn|56431|destrin
mm9_v1_chr14_-_73785035_73785066	1.08212	FOX{F1,F2,J1}.p2	AK002599|Itm2b|16432|integral membrane protein 2B	AK153103|Itm2b|16432|integral membrane protein 2B	AK159307|Itm2b|16432|integral membrane protein 2B	AK003224|Itm2b|16432|integral membrane protein 2B	BC004731|Itm2b|16432|integral membrane protein 2B	AK003587|Itm2b|16432|integral membrane protein 2B	AK003928|Itm2b|16432|integral membrane protein 2B	AK088270|Itm2b|16432|integral membrane protein 2B	AK159340|Itm2b|16432|integral membrane protein 2B	AK159426|Itm2b|16432|integral membrane protein 2B	AK159628|Itm2b|16432|integral membrane protein 2B	AK159792|Itm2b|16432|integral membrane protein 2B	AK160101|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr3_+_89862664_89862687	1.08059	FOX{F1,F2,J1}.p2	BC022598|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr3_-_94910762_94910779	1.07534	FOX{F1,F2,J1}.p2	BC031774|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	NM_008847|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr15_+_35301320_35301357	1.06599	FOX{F1,F2,J1}.p2	BC158052|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr8_-_95803605_95803656	1.0584	FOX{F1,F2,J1}.p2	BC013479|Ces1f|234564|carboxylesterase 1F	AK136491|Ces1f|234564|carboxylesterase 1F	NM_144930|Ces1f|234564|carboxylesterase 1F
mm9_v1_chr17_-_56144975_56145021	1.03982	FOX{F1,F2,J1}.p2	BC026642|Stap2|106766|signal transducing adaptor family member 2	NM_145934|Stap2|106766|signal transducing adaptor family member 2	AK050172|Stap2|106766|signal transducing adaptor family member 2	AK050131|Stap2|106766|signal transducing adaptor family member 2
mm9_v1_chr7_-_117758413_117758468	1.03936	FOX{F1,F2,J1}.p2	BC048706|Sbf2|319934|SET binding factor 2	AK080963|Sbf2|319934|SET binding factor 2	AK087396|Sbf2|319934|SET binding factor 2	AK080952|Sbf2|319934|SET binding factor 2	NM_177324|Sbf2|319934|SET binding factor 2	AK046622|Sbf2|319934|SET binding factor 2
mm9_v1_chrX_+_93650774_93650774	1.03554	FOX{F1,F2,J1}.p2	NM_001159628|Heph|15203|hephaestin	NM_010417|Heph|15203|hephaestin
mm9_v1_chr3_+_99966382_99966393	1.02832	FOX{F1,F2,J1}.p2	Y17851|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2
mm9_v1_chr13_+_32893929_32893948	1.02602	FOX{F1,F2,J1}.p2	AK041886|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr13_+_32893953_32893987	1.01491	FOX{F1,F2,J1}.p2	AK082078|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr18_+_37170365_37170627	1.01362	FOX{F1,F2,J1}.p2	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr15_-_78298904_78298909	1.01087	FOX{F1,F2,J1}.p2	AK004939|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr9_+_118415358_118415568	1.00926	FOX{F1,F2,J1}.p2	AK161568|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AK172292|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC037641|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AF051357|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC003268|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC096467|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	NM_018748|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC023102|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC057561|Golga4|54214|golgi autoantigen, golgin subfamily a, 4
mm9_v1_chr3_+_40698182_40698266	1.00575	FOX{F1,F2,J1}.p2	AK028580|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK014120|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK019438|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK031032|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK169375|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	NM_026622|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	BC051081|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	BC011312|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene
mm9_v1_chr15_-_78685925_78685959	0.99988	FOX{F1,F2,J1}.p2	BC027504|Lgals2|107753|lectin, galactose-binding, soluble 2	AK007364|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008607|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008423|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008636|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008648|Lgals2|107753|lectin, galactose-binding, soluble 2	NM_025622|Lgals2|107753|lectin, galactose-binding, soluble 2
mm9_v1_chr13_+_40955500_40955723	0.999571	FOX{F1,F2,J1}.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr10_+_78243274_78243338	0.999221	FOX{F1,F2,J1}.p2	BC138120|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	BC138140|Slc1a6|20513|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
mm9_v1_chr12_+_25741653_25741728	0.997876	FOX{F1,F2,J1}.p2	BC059030|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr16_-_10395401_10395557	0.997476	FOX{F1,F2,J1}.p2	AK014352|Tekt5|70426|tektin 5	BC115969|Tekt5|70426|tektin 5	NM_001099275|Tekt5|70426|tektin 5	GQ292766|Tekt5|70426|tektin 5
mm9_v1_chr2_+_107130745_107130810	0.993495	FOX{F1,F2,J1}.p2	NM_021275|Kcna4|16492|potassium voltage-gated channel, shaker-related subfamily, member 4	AK036112|Kcna4|16492|potassium voltage-gated channel, shaker-related subfamily, member 4
mm9_v1_chr17_-_46968361_46968361	0.991212	FOX{F1,F2,J1}.p2	BC151032|BC032203|210982|cDNA sequence BC032203	BC151054|BC032203|210982|cDNA sequence BC032203	NM_001100452|BC032203|210982|cDNA sequence BC032203
mm9_v1_chr15_-_101700048_101700137	0.983157	FOX{F1,F2,J1}.p2	BC107395|Krt77|406220|keratin 77	BC107396|Krt77|406220|keratin 77	NM_001003667|Krt77|406220|keratin 77	BC141259|Krt77|406220|keratin 77	AK132513|Krt77|406220|keratin 77
mm9_v1_chr12_+_30687597_30687686	0.979273	FOX{F1,F2,J1}.p2	BC037709|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chrX_+_132779615_132779721	0.978847	FOX{F1,F2,J1}.p2	NM_011712|Wbp5|22381|WW domain binding protein 5	AY459189|Wbp5|22381|WW domain binding protein 5	AK017717|Wbp5|22381|WW domain binding protein 5	AK002214|Wbp5|22381|WW domain binding protein 5	BC020289|Wbp5|22381|WW domain binding protein 5	BC007478|Wbp5|22381|WW domain binding protein 5
mm9_v1_chrX_+_20235512_20235607	0.976742	FOX{F1,F2,J1}.p2	AK088057|Uba1|22201|ubiquitin-like modifier activating enzyme 1	AK088528|Uba1|22201|ubiquitin-like modifier activating enzyme 1	NM_009457|Uba1|22201|ubiquitin-like modifier activating enzyme 1	BC145984|Uba1|22201|ubiquitin-like modifier activating enzyme 1	BC138200|Uba1|22201|ubiquitin-like modifier activating enzyme 1	D10576|Uba1|22201|ubiquitin-like modifier activating enzyme 1
mm9_v1_chr9_+_64880208_64880292	0.974176	FOX{F1,F2,J1}.p2	AK155605|Dpp8|74388|dipeptidylpeptidase 8	BC043124|Dpp8|74388|dipeptidylpeptidase 8	BC059222|Dpp8|74388|dipeptidylpeptidase 8	NM_028906|Dpp8|74388|dipeptidylpeptidase 8
mm9_v1_chr3_-_94277495_94277512	0.971183	FOX{F1,F2,J1}.p2	BC107021|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	AK009192|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	NM_025506|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
mm9_v1_chr4_-_111575347_111575400	0.966067	FOX{F1,F2,J1}.p2	BC021357|Slc5a9|230612|solute carrier family 5 (sodium/glucose cotransporter), member 9	AK029158|Slc5a9|230612|solute carrier family 5 (sodium/glucose cotransporter), member 9	NM_145551|Slc5a9|230612|solute carrier family 5 (sodium/glucose cotransporter), member 9
mm9_v1_chr8_+_36740640_36740782	0.956833	FOX{F1,F2,J1}.p2	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr18_+_37678006_37678134	0.944247	FOX{F1,F2,J1}.p2	AK043492|Pcdhb22|93893|protocadherin beta 22	NM_053147|Pcdhb22|93893|protocadherin beta 22	BC094239|Pcdhb22|93893|protocadherin beta 22	AF326315|Pcdhb22|93893|protocadherin beta 22	AY013784|Pcdhb22|93893|protocadherin beta 22
mm9_v1_chr9_-_115152261_115152330	0.944032	FOX{F1,F2,J1}.p2	
mm9_v1_chr7_-_129245303_129245368	0.942681	FOX{F1,F2,J1}.p2	AK167447|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK089103|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC092379|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC060951|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018717|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK008788|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK009698|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK010307|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK011302|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018688|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK151719|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK152995|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	NM_028177|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm9_v1_chr5_-_31456576_31456630	0.94184	FOX{F1,F2,J1}.p2	BC013452|Mpv17|17527|MpV17 mitochondrial inner membrane protein	AK040477|Mpv17|17527|MpV17 mitochondrial inner membrane protein	M36411|Mpv17|17527|MpV17 mitochondrial inner membrane protein	NM_008622|Mpv17|17527|MpV17 mitochondrial inner membrane protein
mm9_v1_chr4_+_49644923_49645030	0.939736	FOX{F1,F2,J1}.p2	NM_001163263|Rnf20|109331|ring finger protein 20	NM_182999|Rnf20|109331|ring finger protein 20	AK053783|Rnf20|109331|ring finger protein 20	AK085436|Rnf20|109331|ring finger protein 20	AK139883|Rnf20|109331|ring finger protein 20	AK048862|Rnf20|109331|ring finger protein 20	AK051278|Rnf20|109331|ring finger protein 20	BC052482|Rnf20|109331|ring finger protein 20	AK087860|Rnf20|109331|ring finger protein 20	AK220492|Rnf20|109331|ring finger protein 20	AK082529|Rnf20|109331|ring finger protein 20
mm9_v1_chr7_+_53039094_53039107	0.937372	FOX{F1,F2,J1}.p2	BC059845|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr17_-_31281223_31281229	0.936954	FOX{F1,F2,J1}.p2	AK003093|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	NM_009363|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)
mm9_v1_chr10_-_94877824_94877916	0.934722	FOX{F1,F2,J1}.p2	U88327|Socs2|216233|suppressor of cytokine signaling 2	NM_001168657|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr4_+_106851234_106851330	0.93349	FOX{F1,F2,J1}.p2	NM_029565|Tmem59|56374|transmembrane protein 59	AF116911|Tmem59|56374|transmembrane protein 59	BC045145|Tmem59|56374|transmembrane protein 59	AX775905|Tmem59|56374|transmembrane protein 59	AK159761|Tmem59|56374|transmembrane protein 59	BC018379|Tmem59|56374|transmembrane protein 59	AK145644|Tmem59|56374|transmembrane protein 59	AK050162|Tmem59|56374|transmembrane protein 59	BC058273|Tmem59|56374|transmembrane protein 59	AK003252|Tmem59|56374|transmembrane protein 59	AK166772|Tmem59|56374|transmembrane protein 59	AK167058|Tmem59|56374|transmembrane protein 59	BC014732|Tmem59|56374|transmembrane protein 59
mm9_v1_chrX_-_7258126_7258153	0.930309	FOX{F1,F2,J1}.p2	BC132580|Magix|54634|MAGI family member, X-linked	BC132582|Magix|54634|MAGI family member, X-linked
mm9_v1_chr2_+_22924561_22924686	0.919759	FOX{F1,F2,J1}.p2	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr14_-_70607443_70607553	0.918062	FOX{F1,F2,J1}.p2	AF064806|Sorbs3|20410|sorbin and SH3 domain containing 3	NM_011366|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr8_-_95753432_95753442	0.914436	FOX{F1,F2,J1}.p2	BC019208|Ces1e|13897|carboxylesterase 1E	S80191|Ces1e|13897|carboxylesterase 1E
mm9_v1_chr2_+_152561983_152562076	0.912871	FOX{F1,F2,J1}.p2	M31885|Id1|15901|inhibitor of DNA binding 1	AK008264|Id1|15901|inhibitor of DNA binding 1	BC025073|Id1|15901|inhibitor of DNA binding 1	NM_010495|Id1|15901|inhibitor of DNA binding 1	U43884|Id1|15901|inhibitor of DNA binding 1	AB221668|Id1|15901|inhibitor of DNA binding 1	CT010243|Id1|15901|inhibitor of DNA binding 1
mm9_v1_chr2_+_71049762_71049900	0.911835	FOX{F1,F2,J1}.p2	NM_001198872|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198873|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198874|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198875|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198876|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK019441|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK141837|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK150173|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164322|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164437|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992208|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992209|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992210|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2
mm9_v1_chr4_+_154927385_154927543	0.908806	FOX{F1,F2,J1}.p2	BC003294|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr8_-_126384108_126384108	0.906758	FOX{F1,F2,J1}.p2	BC036300|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene	NM_028536|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene
mm9_v1_chr17_-_24135049_24135066	0.905496	FOX{F1,F2,J1}.p2	AB010778|Prss22|70835|protease, serine, 22	BC055854|Prss22|70835|protease, serine, 22	AK014645|Prss22|70835|protease, serine, 22	NM_133731|Prss22|70835|protease, serine, 22
mm9_v1_chr2_+_150574777_150574886	0.905206	FOX{F1,F2,J1}.p2	AK030789|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	NM_172117|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC038126|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC028318|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	AK156685|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6
mm9_v1_chr19_-_40261753_40261779	0.905034	FOX{F1,F2,J1}.p2	BC022151|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC023894|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AY227736|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC034831|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC016494|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AK050082|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	NM_145499|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70
mm9_v1_chr17_-_56261311_56261421	0.904027	FOX{F1,F2,J1}.p2	AF403429|Lrg1|76905|leucine-rich alpha-2-glycoprotein 1	AB055885|Lrg1|76905|leucine-rich alpha-2-glycoprotein 1	BC092077|Lrg1|76905|leucine-rich alpha-2-glycoprotein 1	BC030733|Lrg1|76905|leucine-rich alpha-2-glycoprotein 1	NM_029796|Lrg1|76905|leucine-rich alpha-2-glycoprotein 1
mm9_v1_chr7_+_134123446_134123464	0.896236	FOX{F1,F2,J1}.p2	
mm9_v1_chrX_-_7258190_7258376	0.89555	FOX{F1,F2,J1}.p2	BC099459|Magix|54634|MAGI family member, X-linked	NM_018832|Magix|54634|MAGI family member, X-linked	AK158091|Magix|54634|MAGI family member, X-linked	AK077898|Magix|54634|MAGI family member, X-linked
mm9_v1_chr1_+_97230610_97230736	0.895209	FOX{F1,F2,J1}.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr13_-_99754519_99754519	0.8933	FOX{F1,F2,J1}.p2	AK006311|1700024P04Rik|69382|RIKEN cDNA 1700024P04 gene	NM_027064|1700024P04Rik|69382|RIKEN cDNA 1700024P04 gene
mm9_v1_chr19_+_46782153_46782204	0.892347	FOX{F1,F2,J1}.p2	AK009814|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr1_-_31006599_31006606	0.889723	FOX{F1,F2,J1}.p2	AK148288|Ptp4a1|19243|protein tyrosine phosphatase 4a1	NM_011200|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr1_-_141456740_141456821	0.883792	FOX{F1,F2,J1}.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr19_+_46781921_46781932	0.874106	FOX{F1,F2,J1}.p2	NM_020577|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr11_+_60166826_60166909	0.86908	FOX{F1,F2,J1}.p2	AK047468|Lrrc48|74665|leucine rich repeat containing 48	AK049695|Lrrc48|74665|leucine rich repeat containing 48	BC018412|Lrrc48|74665|leucine rich repeat containing 48	AK015430|Lrrc48|74665|leucine rich repeat containing 48	NM_029044|Lrrc48|74665|leucine rich repeat containing 48
mm9_v1_chr9_+_57351830_57351839	0.866611	FOX{F1,F2,J1}.p2	AK140177|Rpp25|102614|ribonuclease P 25 subunit (human)	AK082822|Rpp25|102614|ribonuclease P 25 subunit (human)
mm9_v1_chr1_-_179178874_179178897	0.858142	FOX{F1,F2,J1}.p2	AF124142|Akt3|23797|thymoma viral proto-oncogene 3	BC066861|Akt3|23797|thymoma viral proto-oncogene 3	NM_011785|Akt3|23797|thymoma viral proto-oncogene 3
mm9_v1_chr6_+_146591082_146591141	0.857086	FOX{F1,F2,J1}.p2	AK009742|Med21|108098|mediator complex subunit 21	AK012217|Med21|108098|mediator complex subunit 21	NM_025315|Med21|108098|mediator complex subunit 21	AK014428|Med21|108098|mediator complex subunit 21	AK019417|Med21|108098|mediator complex subunit 21	BC012286|Med21|108098|mediator complex subunit 21
mm9_v1_chr11_+_29642667_29642710	0.850092	FOX{F1,F2,J1}.p2	
mm9_v1_chr5_-_44162032_44162072	0.849963	FOX{F1,F2,J1}.p2	BC023291|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr1_+_174065263_174065366	0.848489	FOX{F1,F2,J1}.p2	AK218140|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr15_+_10106992_10106998	0.848367	FOX{F1,F2,J1}.p2	AK054551|Prlr|19116|prolactin receptor	NM_011169|Prlr|19116|prolactin receptor	AK042147|Prlr|19116|prolactin receptor
mm9_v1_chr12_+_78339071_78339134	0.84817	FOX{F1,F2,J1}.p2	BC010666|Fut8|53618|fucosyltransferase 8	AK051811|Fut8|53618|fucosyltransferase 8
mm9_v1_chrX_+_13209894_13209986	0.847996	FOX{F1,F2,J1}.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr9_-_21875784_21875847	0.840437	FOX{F1,F2,J1}.p2	AY072705|Zfp653|319601|zinc finger protein 653	BC038037|Zfp653|319601|zinc finger protein 653	NM_177318|Zfp653|319601|zinc finger protein 653	AK171735|Zfp653|319601|zinc finger protein 653
mm9_v1_chr2_+_154026115_154026115	0.839734	FOX{F1,F2,J1}.p2	NM_153418|U46068|228801|cDNA sequence U46068	U46068|U46068|228801|cDNA sequence U46068
mm9_v1_chr7_+_148974915_148974915	0.831508	FOX{F1,F2,J1}.p2	NM_010844|Muc5ac|17833|mucin 5, subtypes A and C, tracheobronchial/gastric
mm9_v1_chr4_-_116494091_116494112	0.828303	FOX{F1,F2,J1}.p2	AK049217|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	AK043902|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	AK078929|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	NM_146256|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like
mm9_v1_chr18_+_37656644_37656807	0.821102	FOX{F1,F2,J1}.p2	AK029163|Pcdhb19|93890|protocadherin beta 19	AK147520|Pcdhb19|93890|protocadherin beta 19	AK160654|Pcdhb19|93890|protocadherin beta 19	NM_053144|Pcdhb19|93890|protocadherin beta 19	AK046363|Pcdhb19|93890|protocadherin beta 19	BC141290|Pcdhb19|93890|protocadherin beta 19	BC141291|Pcdhb19|93890|protocadherin beta 19	AF326312|Pcdhb19|93890|protocadherin beta 19	AY013780|Pcdhb19|93890|protocadherin beta 19
mm9_v1_chr17_-_65929913_65929945	0.818541	FOX{F1,F2,J1}.p2	
mm9_v1_chr15_-_100518324_100518351	0.816307	FOX{F1,F2,J1}.p2	BC011218|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007931|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007392|Cela1|109901|chymotrypsin-like elastase family, member 1	NM_033612|Cela1|109901|chymotrypsin-like elastase family, member 1
mm9_v1_chr7_-_25084361_25084383	0.811108	FOX{F1,F2,J1}.p2	AK149960|Zfp61|22719|zinc finger protein 61	AK148158|Zfp61|22719|zinc finger protein 61
mm9_v1_chr2_+_34262399_34262511	0.810623	FOX{F1,F2,J1}.p2	BC043296|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr17_+_25960571_25960660	0.809558	FOX{F1,F2,J1}.p2	NM_173741|Wdr24|268933|WD repeat domain 24	AK078694|Wdr24|268933|WD repeat domain 24	AK170253|Wdr24|268933|WD repeat domain 24	BC037651|Wdr24|268933|WD repeat domain 24
mm9_v1_chrX_+_131135770_131135834	0.80472	FOX{F1,F2,J1}.p2	AK141861|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK164115|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK168116|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	BC005461|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK169104|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK077716|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	NM_019868|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2
mm9_v1_chr1_-_141273617_141273676	0.802433	FOX{F1,F2,J1}.p2	AF406641|Crb1|170788|crumbs homolog 1 (Drosophila)	AY450552|Crb1|170788|crumbs homolog 1 (Drosophila)	NM_133239|Crb1|170788|crumbs homolog 1 (Drosophila)	AF492496|Crb1|170788|crumbs homolog 1 (Drosophila)
mm9_v1_chr16_+_36914313_36914320	0.802249	FOX{F1,F2,J1}.p2	AK220188|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr6_-_126799101_126799171	0.800384	FOX{F1,F2,J1}.p2	BC058378|Ndufa9|66108|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9	AK003214|Ndufa9|66108|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9	AK012366|Ndufa9|66108|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9	AK003137|Ndufa9|66108|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9	NM_025358|Ndufa9|66108|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9
mm9_v1_chr18_+_38409902_38409977	0.790366	FOX{F1,F2,J1}.p2	NM_024179|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK035876|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK002437|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK171837|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK079423|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	BC002117|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK141675|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK172900|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene
mm9_v1_chr3_+_96636596_96636596	0.784996	FOX{F1,F2,J1}.p2	NM_001146001|Pdzk1|59020|PDZ domain containing 1
mm9_v1_chr4_-_116136779_116136820	0.782836	FOX{F1,F2,J1}.p2	NM_001042743|Mast2|17776|microtubule associated serine/threonine kinase 2	NM_008641|Mast2|17776|microtubule associated serine/threonine kinase 2
mm9_v1_chr4_+_62220880_62220880	0.780032	FOX{F1,F2,J1}.p2	AJ250999|Rgs3|50780|regulator of G-protein signaling 3	NM_019492|Rgs3|50780|regulator of G-protein signaling 3
mm9_v1_chr3_-_94910641_94910756	0.778704	FOX{F1,F2,J1}.p2	D86177|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK167816|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr8_+_74446723_74446817	0.777051	FOX{F1,F2,J1}.p2	NM_133358|Zfp617|170938|zinc finger protein 617	AK143880|Zfp617|170938|zinc finger protein 617	AB020542|Zfp617|170938|zinc finger protein 617	AK146644|Zfp617|170938|zinc finger protein 617	BC014712|Zfp617|170938|zinc finger protein 617
mm9_v1_chr13_+_36209724_36209798	0.770293	FOX{F1,F2,J1}.p2	AK020164|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK170986|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK076259|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK054370|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	BC002147|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK013211|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr11_-_51449370_51449402	0.766067	FOX{F1,F2,J1}.p2	AK075599|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)	NM_025346|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr18_+_61265225_61265605	0.766061	FOX{F1,F2,J1}.p2	AK146069|Csf1r|12978|colony stimulating factor 1 receptor	NM_001037859|Csf1r|12978|colony stimulating factor 1 receptor	BC066863|Csf1r|12978|colony stimulating factor 1 receptor	BC050024|Csf1r|12978|colony stimulating factor 1 receptor	AK171241|Csf1r|12978|colony stimulating factor 1 receptor	AK156550|Csf1r|12978|colony stimulating factor 1 receptor	AK155565|Csf1r|12978|colony stimulating factor 1 receptor	AK155488|Csf1r|12978|colony stimulating factor 1 receptor	AK079247|Csf1r|12978|colony stimulating factor 1 receptor	AK155576|Csf1r|12978|colony stimulating factor 1 receptor	AK155858|Csf1r|12978|colony stimulating factor 1 receptor	AK154128|Csf1r|12978|colony stimulating factor 1 receptor	AK155640|Csf1r|12978|colony stimulating factor 1 receptor	AK155654|Csf1r|12978|colony stimulating factor 1 receptor	AK171386|Csf1r|12978|colony stimulating factor 1 receptor	AK004947|Csf1r|12978|colony stimulating factor 1 receptor	AK154556|Csf1r|12978|colony stimulating factor 1 receptor	AK154653|Csf1r|12978|colony stimulating factor 1 receptor	AK154699|Csf1r|12978|colony stimulating factor 1 receptor	AK076215|Csf1r|12978|colony stimulating factor 1 receptor	AK143545|Csf1r|12978|colony stimulating factor 1 receptor	X06368|Csf1r|12978|colony stimulating factor 1 receptor	X68932|Csf1r|12978|colony stimulating factor 1 receptor	AK080326|Csf1r|12978|colony stimulating factor 1 receptor	BC043054|Csf1r|12978|colony stimulating factor 1 receptor	AK089498|Csf1r|12978|colony stimulating factor 1 receptor	AK171543|Csf1r|12978|colony stimulating factor 1 receptor	BC036343|Csf1r|12978|colony stimulating factor 1 receptor	AK041299|Csf1r|12978|colony stimulating factor 1 receptor
mm9_v1_chr11_+_97311458_97311517	0.764813	FOX{F1,F2,J1}.p2	NM_021493|Arhgap23|58996|Rho GTPase activating protein 23
mm9_v1_chr2_+_32390780_32390878	0.763467	FOX{F1,F2,J1}.p2	AK131145|Fam102a|98952|family with sequence similarity 102, member A	AK170536|Fam102a|98952|family with sequence similarity 102, member A	AK049032|Fam102a|98952|family with sequence similarity 102, member A	NM_153560|Fam102a|98952|family with sequence similarity 102, member A
mm9_v1_chr4_+_94281210_94281261	0.760522	FOX{F1,F2,J1}.p2	NM_026319|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC005798|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK014770|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK011690|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK053369|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC023760|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC049156|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)
mm9_v1_chr1_-_172145380_172145502	0.760196	FOX{F1,F2,J1}.p2	Y10725|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr11_+_58680717_58680792	0.758153	FOX{F1,F2,J1}.p2	AK030099|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	AK134479|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	BC058081|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	NM_172403|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene
mm9_v1_chr19_+_34682418_34682459	0.75517	FOX{F1,F2,J1}.p2	AK150632|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK151442|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK152620|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	NM_001005858|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK077243|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene
mm9_v1_chr15_-_76554192_76554281	0.753898	FOX{F1,F2,J1}.p2	AK046662|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	BC026997|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	BC019462|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK053546|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK163615|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK021050|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK165937|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK075645|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK085641|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK140368|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK140578|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	NM_145472|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	NM_176828|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene
mm9_v1_chr16_+_32271553_32271694	0.750693	FOX{F1,F2,J1}.p2	AK009281|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene	NM_183283|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene
mm9_v1_chr17_-_33855557_33855658	0.745888	FOX{F1,F2,J1}.p2	BC002144|March2|224703|membrane-associated ring finger (C3HC4) 2	AK053434|March2|224703|membrane-associated ring finger (C3HC4) 2	AK079234|March2|224703|membrane-associated ring finger (C3HC4) 2	AK081495|March2|224703|membrane-associated ring finger (C3HC4) 2	AK036614|March2|224703|membrane-associated ring finger (C3HC4) 2	AK039778|March2|224703|membrane-associated ring finger (C3HC4) 2	AK040163|March2|224703|membrane-associated ring finger (C3HC4) 2	NM_145486|March2|224703|membrane-associated ring finger (C3HC4) 2
mm9_v1_chr3_-_95085997_95085997	0.742056	FOX{F1,F2,J1}.p2	BC057546|Prune|229589|prune homolog (Drosophila)	NM_173347|Prune|229589|prune homolog (Drosophila)
mm9_v1_chr17_-_20185168_20185168	0.735125	FOX{F1,F2,J1}.p2	NM_001104566|Vmn2r104|22313|vomeronasal 2, receptor 104
mm9_v1_chr1_+_174012909_174013066	0.735049	FOX{F1,F2,J1}.p2	AK171625|Copa|12847|coatomer protein complex subunit alpha	AK043479|Copa|12847|coatomer protein complex subunit alpha	AK164910|Copa|12847|coatomer protein complex subunit alpha	BC047429|Copa|12847|coatomer protein complex subunit alpha	BC024070|Copa|12847|coatomer protein complex subunit alpha	AF248032|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr12_-_86611513_86611563	0.730014	FOX{F1,F2,J1}.p2	BC079861|Mlh3|217716|mutL homolog 3 (E coli)	NM_175337|Mlh3|217716|mutL homolog 3 (E coli)	BC072599|Mlh3|217716|mutL homolog 3 (E coli)	AK132195|Mlh3|217716|mutL homolog 3 (E coli)	AK035887|Mlh3|217716|mutL homolog 3 (E coli)
mm9_v1_chr7_-_149069070_149069207	0.728068	FOX{F1,F2,J1}.p2	AK049198|Tollip|54473|toll interacting protein
mm9_v1_chr3_-_98697132_98697169	0.726428	FOX{F1,F2,J1}.p2	AK078908|Hao2|56185|hydroxyacid oxidase 2	AK018684|Hao2|56185|hydroxyacid oxidase 2	AK143991|Hao2|56185|hydroxyacid oxidase 2	AF272947|Hao2|56185|hydroxyacid oxidase 2	NM_019545|Hao2|56185|hydroxyacid oxidase 2
mm9_v1_chr11_-_97914582_97914775	0.723953	FOX{F1,F2,J1}.p2	AJ608761|Stac2|217154|SH3 and cysteine rich domain 2	BC029794|Stac2|217154|SH3 and cysteine rich domain 2	AK144433|Stac2|217154|SH3 and cysteine rich domain 2	AK079357|Stac2|217154|SH3 and cysteine rich domain 2	BC024864|Stac2|217154|SH3 and cysteine rich domain 2	AK078132|Stac2|217154|SH3 and cysteine rich domain 2	NM_146028|Stac2|217154|SH3 and cysteine rich domain 2
mm9_v1_chr16_+_21423263_21423279	0.722629	FOX{F1,F2,J1}.p2	AK141678|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	AK149336|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	BC055323|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)
mm9_v1_chr2_+_163428044_163428072	0.719693	FOX{F1,F2,J1}.p2	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr17_+_70911084_70911126	0.718355	FOX{F1,F2,J1}.p2	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr2_+_172073991_172073998	0.695911	FOX{F1,F2,J1}.p2	AK038677|Mc3r|17201|melanocortin 3 receptor	NM_008561|Mc3r|17201|melanocortin 3 receptor	BC103669|Mc3r|17201|melanocortin 3 receptor	BC104730|Mc3r|17201|melanocortin 3 receptor	BC105667|Mc3r|17201|melanocortin 3 receptor	BC105668|Mc3r|17201|melanocortin 3 receptor
mm9_v1_chr11_+_19824417_19824473	0.695364	FOX{F1,F2,J1}.p2	AK153700|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK036430|Spred2|114716|sprouty-related, EVH1 domain containing 2	NM_033523|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK157817|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr11_+_43247235_43247249	0.690541	FOX{F1,F2,J1}.p2	AK047597|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr5_+_145965427_145965536	0.688485	FOX{F1,F2,J1}.p2	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr5_+_29972960_29973052	0.687864	FOX{F1,F2,J1}.p2	AK185151|Ube3c|100763|ubiquitin protein ligase E3C	AK203997|Ube3c|100763|ubiquitin protein ligase E3C	AK049125|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr4_+_101927543_101927649	0.684818	FOX{F1,F2,J1}.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr1_-_55283618_55283625	0.683878	FOX{F1,F2,J1}.p2	AK012229|Rftn2|74013|raftlin family member 2	AK031158|Rftn2|74013|raftlin family member 2	BC038341|Rftn2|74013|raftlin family member 2	NM_028713|Rftn2|74013|raftlin family member 2
mm9_v1_chr5_+_122298977_122299040	0.678756	FOX{F1,F2,J1}.p2	AK039192|Fam109a|231717|family with sequence similarity 109, member A	AK033618|Fam109a|231717|family with sequence similarity 109, member A	NM_175474|Fam109a|231717|family with sequence similarity 109, member A
mm9_v1_chr8_-_128016609_128016654	0.678627	FOX{F1,F2,J1}.p2	NM_001081337|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2	BC150682|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2
mm9_v1_chr2_+_154016550_154016559	0.676742	FOX{F1,F2,J1}.p2	BC060982|U46068|228801|cDNA sequence U46068	BC089529|U46068|228801|cDNA sequence U46068	NM_001012392|U46068|228801|cDNA sequence U46068	AK146605|U46068|228801|cDNA sequence U46068	BC100436|U46068|228801|cDNA sequence U46068
mm9_v1_chr7_-_133520876_133520891	0.674288	FOX{F1,F2,J1}.p2	BC085491|Spns1|73658|spinster homolog 1 (Drosophila)
mm9_v1_chr1_+_173053280_173053294	0.673863	FOX{F1,F2,J1}.p2	BC061017|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene
mm9_v1_chr7_-_53987912_53987980	0.670512	FOX{F1,F2,J1}.p2	NM_011316|Saa4|20211|serum amyloid A 4	U02554|Saa4|20211|serum amyloid A 4
mm9_v1_chr6_+_78375973_78375976	0.66658	FOX{F1,F2,J1}.p2	AK133506|Reg1|19692|regenerating islet-derived 1	AK160452|Reg1|19692|regenerating islet-derived 1	NM_009042|Reg1|19692|regenerating islet-derived 1
mm9_v1_chr19_+_7631935_7632013	0.663595	FOX{F1,F2,J1}.p2	AK163505|Pla2g16|225845|phospholipase A2, group XVI	NM_139269|Pla2g16|225845|phospholipase A2, group XVI	AX775891|Pla2g16|225845|phospholipase A2, group XVI	AK052657|Pla2g16|225845|phospholipase A2, group XVI	AK039703|Pla2g16|225845|phospholipase A2, group XVI	AK042007|Pla2g16|225845|phospholipase A2, group XVI	BC024581|Pla2g16|225845|phospholipase A2, group XVI
mm9_v1_chr3_+_96329090_96329142	0.663395	FOX{F1,F2,J1}.p2	AJ557515|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)	BC022603|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)	NM_027126|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)	AK014082|Hfe2|69585|hemochromatosis type 2 (juvenile) (human homolog)
mm9_v1_chr19_+_7131234_7131258	0.661878	FOX{F1,F2,J1}.p2	NM_134147|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr8_+_37520601_37520649	0.661172	FOX{F1,F2,J1}.p2	AK032504|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene	AK038497|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene	AK089162|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene
mm9_v1_chr10_+_75931622_75931715	0.646287	FOX{F1,F2,J1}.p2	AK122313|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AJ006590|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AK051901|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	BC052452|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	NM_019434|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
mm9_v1_chr2_+_34262372_34262384	0.642487	FOX{F1,F2,J1}.p2	AK042154|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	AK148428|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr5_+_31191224_31191333	0.642296	FOX{F1,F2,J1}.p2	AK029676|Agbl5|231093|ATP/GTP binding protein-like 5	NM_174849|Agbl5|231093|ATP/GTP binding protein-like 5	AK044195|Agbl5|231093|ATP/GTP binding protein-like 5	AK083656|Agbl5|231093|ATP/GTP binding protein-like 5
mm9_v1_chr10_+_127691166_127691233	0.639295	FOX{F1,F2,J1}.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr15_-_102552527_102552608	0.638171	FOX{F1,F2,J1}.p2	AK087513|Calcoco1|67488|calcium binding and coiled coil domain 1	NM_026192|Calcoco1|67488|calcium binding and coiled coil domain 1
mm9_v1_chr2_-_164104007_164104044	0.634792	FOX{F1,F2,J1}.p2	M35732|Svs4|20941|seminal vesicle secretory protein 4	AK020349|Svs4|20941|seminal vesicle secretory protein 4	BC115604|Svs4|20941|seminal vesicle secretory protein 4	BC115605|Svs4|20941|seminal vesicle secretory protein 4	NM_009300|Svs4|20941|seminal vesicle secretory protein 4
mm9_v1_chr2_-_118305356_118305444	0.633562	FOX{F1,F2,J1}.p2	M29264|Srp14|20813|signal recognition particle 14	AK156845|Srp14|20813|signal recognition particle 14	AK167821|Srp14|20813|signal recognition particle 14	BC021537|Srp14|20813|signal recognition particle 14	AK168144|Srp14|20813|signal recognition particle 14	AK019310|Srp14|20813|signal recognition particle 14	NM_009273|Srp14|20813|signal recognition particle 14
mm9_v1_chr18_-_43532846_43532925	0.631725	FOX{F1,F2,J1}.p2	AK161509|Dpysl3|22240|dihydropyrimidinase-like 3	AK077000|Dpysl3|22240|dihydropyrimidinase-like 3	AK133040|Dpysl3|22240|dihydropyrimidinase-like 3	NM_001136086|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr7_+_24919177_24919260	0.627994	FOX{F1,F2,J1}.p2	NM_019941|Zfp235|56525|zinc finger protein 235	AK045726|Zfp235|56525|zinc finger protein 235	AK002713|Zfp235|56525|zinc finger protein 235	AK147833|Zfp235|56525|zinc finger protein 235	AF167321|Zfp235|56525|zinc finger protein 235	AK139127|Zfp235|56525|zinc finger protein 235	BC099965|Zfp235|56525|zinc finger protein 235
mm9_v1_chr11_-_46503858_46503858	0.622325	FOX{F1,F2,J1}.p2	AB009015|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2	NM_001161356|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr5_-_134932407_134932628	0.618868	FOX{F1,F2,J1}.p2	BC057091|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC058964|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF247161|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497637|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497638|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497639|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343348|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343351|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497640|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK078488|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343350|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497642|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343349|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497641|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK051310|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF260133|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030287|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030288|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030289|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF257475|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK147196|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC050822|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081462|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081463|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081464|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081466|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081467|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081468|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081469|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081470|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_020331|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1
mm9_v1_chr16_-_4879787_4879850	0.618577	FOX{F1,F2,J1}.p2	BC013706|Fam100a|207740|family with sequence similarity 100, member A	BC064081|Fam100a|207740|family with sequence similarity 100, member A	BC056472|Fam100a|207740|family with sequence similarity 100, member A	AK005316|Fam100a|207740|family with sequence similarity 100, member A	NM_145359|Fam100a|207740|family with sequence similarity 100, member A
mm9_v1_chr4_+_126530769_126530837	0.61607	FOX{F1,F2,J1}.p2	
mm9_v1_chr1_+_90303576_90303673	0.614177	FOX{F1,F2,J1}.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr2_-_122011924_122011924	0.613215	FOX{F1,F2,J1}.p2	AK015195|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)	NM_026251|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)
mm9_v1_chr5_-_21207158_21207169	0.613114	FOX{F1,F2,J1}.p2	AK041194|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	AK080888|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	NM_178728|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D
mm9_v1_chr8_-_35153699_35153753	0.613023	FOX{F1,F2,J1}.p2	
mm9_v1_chr3_-_108365049_108365097	0.608632	FOX{F1,F2,J1}.p2	AK155399|Tmem167b|67495|transmembrane protein 167B
mm9_v1_chr2_+_58607580_58607600	0.607908	FOX{F1,F2,J1}.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr12_-_72237590_72237690	0.607874	FOX{F1,F2,J1}.p2	AK012712|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK171071|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AF150101|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC028435|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC024370|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK018764|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK165848|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024853|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024854|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_013896|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK172179|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)
mm9_v1_chr3_+_92748407_92748407	0.607556	FOX{F1,F2,J1}.p2	AF176515|Lce3c|94060|late cornified envelope 3C	AK009036|Lce3c|94060|late cornified envelope 3C	NM_033175|Lce3c|94060|late cornified envelope 3C
mm9_v1_chr3_-_144512249_144512265	0.607515	FOX{F1,F2,J1}.p2	BC058766|Clca4|229927|chloride channel calcium activated 4	AY008277|Clca4|229927|chloride channel calcium activated 4	NM_139148|Clca4|229927|chloride channel calcium activated 4
mm9_v1_chr12_+_111805938_111806039	0.605569	FOX{F1,F2,J1}.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr19_+_12752655_12752655	0.60495	FOX{F1,F2,J1}.p2	BC065104|Olfr1443|258693|olfactory receptor 1443	NM_146698|Olfr1443|258693|olfactory receptor 1443
mm9_v1_chr3_+_137286635_137286835	0.604127	FOX{F1,F2,J1}.p2	AK018944|Ddit4l|73284|DNA-damage-inducible transcript 4-like	NM_030143|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK006617|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK053333|Ddit4l|73284|DNA-damage-inducible transcript 4-like	BC038131|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AF335325|Ddit4l|73284|DNA-damage-inducible transcript 4-like
mm9_v1_chr4_+_104438905_104438999	0.602163	FOX{F1,F2,J1}.p2	AK050313|C8b|110382|complement component 8, beta polypeptide	NM_133882|C8b|110382|complement component 8, beta polypeptide	BC096382|C8b|110382|complement component 8, beta polypeptide	AB077304|C8b|110382|complement component 8, beta polypeptide	AB077305|C8b|110382|complement component 8, beta polypeptide	AB077306|C8b|110382|complement component 8, beta polypeptide
mm9_v1_chr12_-_93024875_93024875	0.601809	FOX{F1,F2,J1}.p2	AK036612|Ston2|108800|stonin 2	NM_175367|Ston2|108800|stonin 2
mm9_v1_chr1_+_174628164_174628196	0.601227	FOX{F1,F2,J1}.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chr11_+_19824374_19824394	0.59516	FOX{F1,F2,J1}.p2	BC066013|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr2_-_7317513_7317626	0.5937	FOX{F1,F2,J1}.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr4_-_102963418_102963467	0.592786	FOX{F1,F2,J1}.p2	BC107404|4921539E11Rik|70941|RIKEN cDNA 4921539E11 gene	BC107405|4921539E11Rik|70941|RIKEN cDNA 4921539E11 gene	AK015018|4921539E11Rik|70941|RIKEN cDNA 4921539E11 gene	AK161421|4921539E11Rik|70941|RIKEN cDNA 4921539E11 gene	NM_001163494|4921539E11Rik|70941|RIKEN cDNA 4921539E11 gene	NM_027612|4921539E11Rik|70941|RIKEN cDNA 4921539E11 gene
mm9_v1_chr14_-_11994524_11994548	0.59107	FOX{F1,F2,J1}.p2	AF055573|Fhit|14198|fragile histidine triad gene	NM_010210|Fhit|14198|fragile histidine triad gene	AF047699|Fhit|14198|fragile histidine triad gene
mm9_v1_chr11_-_110112926_110113089	0.589243	FOX{F1,F2,J1}.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr16_+_56075576_56075640	0.589042	FOX{F1,F2,J1}.p2	AK012740|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK085060|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK013090|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK122542|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK010813|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164100|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK020068|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK083086|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164354|Senp7|66315|SUMO1/sentrin specific peptidase 7	BC058593|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr4_-_57929087_57929168	0.587203	FOX{F1,F2,J1}.p2	BC030929|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK085537|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	BC095953|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	NM_178727|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK035369|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene
mm9_v1_chr12_-_59370171_59370244	0.583498	FOX{F1,F2,J1}.p2	BC019452|Clec14a|66864|C-type lectin domain family 14, member a	AK014681|Clec14a|66864|C-type lectin domain family 14, member a	NM_025809|Clec14a|66864|C-type lectin domain family 14, member a
mm9_v1_chr19_-_47044056_47044056	0.570952	FOX{F1,F2,J1}.p2	NM_001164365|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr17_-_31281184_31281204	0.570836	FOX{F1,F2,J1}.p2	BC050086|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	X51697|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	BC087889|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)
mm9_v1_chr5_+_3236388_3236389	0.569129	FOX{F1,F2,J1}.p2	AK146116|Gm15772|100034726|ribosomal protein L26 pseudogene	X80699|Gm15772|100034726|ribosomal protein L26 pseudogene
mm9_v1_chr1_-_132611151_132611152	0.560905	FOX{F1,F2,J1}.p2	EU334169|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616666|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616667|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616668|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616669|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616670|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_001162416|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr19_+_30307417_30307431	0.557653	FOX{F1,F2,J1}.p2	AK149484|Mbl2|17195|mannose-binding lectin (protein C) 2	S42294|Mbl2|17195|mannose-binding lectin (protein C) 2	BC010760|Mbl2|17195|mannose-binding lectin (protein C) 2
mm9_v1_chr11_+_69906223_69906270	0.557061	FOX{F1,F2,J1}.p2	X53042|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr3_-_88262982_88263022	0.556598	FOX{F1,F2,J1}.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr19_+_4006795_4006924	0.552614	FOX{F1,F2,J1}.p2	
mm9_v1_chr11_-_69476065_69476093	0.552128	FOX{F1,F2,J1}.p2	BC026776|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK172020|Mpdu1|24070|mannose-P-dolichol utilization defect 1	BC048871|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AB024713|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK040432|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK089426|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr4_-_45120942_45121003	0.535853	FOX{F1,F2,J1}.p2	AK003822|Tomm5|68512|translocase of outer mitochondrial membrane 5 homolog (yeast)	NM_001099675|Tomm5|68512|translocase of outer mitochondrial membrane 5 homolog (yeast)	NM_001134646|Tomm5|68512|translocase of outer mitochondrial membrane 5 homolog (yeast)
mm9_v1_chr9_-_44611055_44611072	0.532441	FOX{F1,F2,J1}.p2	AK149384|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr9_-_21875719_21875761	0.531079	FOX{F1,F2,J1}.p2	AK046492|Zfp653|319601|zinc finger protein 653	AK157635|Zfp653|319601|zinc finger protein 653
mm9_v1_chr17_+_27166203_27166342	0.530869	FOX{F1,F2,J1}.p2	AY141192|Ggnbp1|70772|gametogenetin binding protein 1	NM_027544|Ggnbp1|70772|gametogenetin binding protein 1	AB250379|Ggnbp1|70772|gametogenetin binding protein 1	AK077129|Ggnbp1|70772|gametogenetin binding protein 1	BC049764|Ggnbp1|70772|gametogenetin binding protein 1
mm9_v1_chr17_+_85082504_85082511	0.529126	FOX{F1,F2,J1}.p2	AK004871|Abcg8|67470|ATP-binding cassette, sub-family G (WHITE), member 8
mm9_v1_chr3_-_92674126_92674141	0.51618	FOX{F1,F2,J1}.p2	NM_025621|2310050C09Rik|66533|RIKEN cDNA 2310050C09 gene
mm9_v1_chr11_-_68635236_68635451	0.505521	FOX{F1,F2,J1}.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr16_-_38433223_38433224	0.504968	FOX{F1,F2,J1}.p2	BC030670|Pla1a|85031|phospholipase A1 member A	AF063498|Pla1a|85031|phospholipase A1 member A	NM_134102|Pla1a|85031|phospholipase A1 member A
mm9_v1_chr10_+_127691272_127691399	0.502362	FOX{F1,F2,J1}.p2	BC022137|Apon|28194|apolipoprotein N	BC030734|Apon|28194|apolipoprotein N
mm9_v1_chr10_+_127238205_127238239	0.501549	FOX{F1,F2,J1}.p2	AK149404|Rdh16|19683|retinol dehydrogenase 16	NM_009040|Rdh16|19683|retinol dehydrogenase 16	AF030513|Rdh16|19683|retinol dehydrogenase 16	BC089612|Rdh16|19683|retinol dehydrogenase 16
mm9_v1_chr1_-_172145521_172145534	0.497906	FOX{F1,F2,J1}.p2	BC058732|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	NM_010633|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	AK013347|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr3_-_88262805_88262805	0.497583	FOX{F1,F2,J1}.p2	NM_001163491|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr16_+_49699314_49699432	0.496254	FOX{F1,F2,J1}.p2	DQ266091|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AF274590|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK047217|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	NM_028680|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK014731|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138143|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138144|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)
mm9_v1_chr6_-_125236045_125236060	0.496194	FOX{F1,F2,J1}.p2	BC050770|Tuba3a|22144|tubulin, alpha 3A	BC089547|Tuba3a|22144|tubulin, alpha 3A	M13442|Tuba3a|22144|tubulin, alpha 3A	AK132775|Tuba3a|22144|tubulin, alpha 3A	NM_009446|Tuba3a|22144|tubulin, alpha 3A
mm9_v1_chr19_+_30307446_30307456	0.493618	FOX{F1,F2,J1}.p2	D11440|Mbl2|17195|mannose-binding lectin (protein C) 2	NM_010776|Mbl2|17195|mannose-binding lectin (protein C) 2
mm9_v1_chr5_+_3928177_3928370	0.490394	FOX{F1,F2,J1}.p2	AK031740|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	NM_194462|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK168404|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK008727|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK017707|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AJ582913|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9	AK080442|Akap9|100986|A kinase (PRKA) anchor protein (yotiao) 9
mm9_v1_chr2_+_163428073_163428114	0.488977	FOX{F1,F2,J1}.p2	AK043791|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK052794|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK018052|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK156641|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK081680|Ttpal|76080|tocopherol (alpha) transfer protein-like	BC052389|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK033600|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr16_-_88885333_88885333	0.486758	FOX{F1,F2,J1}.p2	AF345294|Krtap16-4|170654|keratin associated protein 16-4	BC116200|Krtap16-4|170654|keratin associated protein 16-4	BC116201|Krtap16-4|170654|keratin associated protein 16-4	NM_130873|Krtap16-4|170654|keratin associated protein 16-4
mm9_v1_chr7_+_118172447_118172534	0.483901	FOX{F1,F2,J1}.p2	NM_009431|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040331|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC024749|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK083921|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK045101|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040205|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC080719|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC060091|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK148536|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC010344|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC053910|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	L49502|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr2_-_155984800_155984951	0.479533	FOX{F1,F2,J1}.p2	AK134091|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr10_+_127142225_127142311	0.47875	FOX{F1,F2,J1}.p2	BC147605|Myo1a|432516|myosin IA	BC147612|Myo1a|432516|myosin IA	AF009960|Myo1a|432516|myosin IA	NM_001081219|Myo1a|432516|myosin IA
mm9_v1_chr4_-_116312569_116312608	0.475017	FOX{F1,F2,J1}.p2	AK216201|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK200998|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK184360|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK187660|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK189553|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK196298|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr10_+_33577526_33577529	0.470044	FOX{F1,F2,J1}.p2	AF026075|Sult3a1|57430|sulfotransferase family 3A, member 1	BC125593|Sult3a1|57430|sulfotransferase family 3A, member 1	BC125595|Sult3a1|57430|sulfotransferase family 3A, member 1	NM_020565|Sult3a1|57430|sulfotransferase family 3A, member 1
mm9_v1_chr7_-_133727793_133727820	0.465634	FOX{F1,F2,J1}.p2	NM_001146311|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC047120|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr7_+_52590612_52590774	0.453641	FOX{F1,F2,J1}.p2	AK017230|Hrc|15464|histidine rich calcium binding protein	NM_010473|Hrc|15464|histidine rich calcium binding protein	AF132218|Hrc|15464|histidine rich calcium binding protein	AF158597|Hrc|15464|histidine rich calcium binding protein	BC141121|Hrc|15464|histidine rich calcium binding protein
mm9_v1_chr9_+_57535734_57535814	0.451462	FOX{F1,F2,J1}.p2	AK005000|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	NM_009992|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	BC125440|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	BC125444|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1
mm9_v1_chr19_-_38298593_38298596	0.451099	FOX{F1,F2,J1}.p2	AK077572|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene
mm9_v1_chr5_-_147032490_147032561	0.450043	FOX{F1,F2,J1}.p2	AK017576|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK029912|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK150269|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK152106|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chr4_+_40419212_40419212	0.441792	FOX{F1,F2,J1}.p2	AK044217|Tmem215|320500|transmembrane protein 215	AK044627|Tmem215|320500|transmembrane protein 215	NM_177175|Tmem215|320500|transmembrane protein 215
mm9_v1_chr9_-_107240625_107240680	0.43665	FOX{F1,F2,J1}.p2	BC011431|Hemk1|69536|HemK methyltransferase family member 1	AK054445|Hemk1|69536|HemK methyltransferase family member 1	AK088071|Hemk1|69536|HemK methyltransferase family member 1	NM_133984|Hemk1|69536|HemK methyltransferase family member 1
mm9_v1_chr11_-_100355280_100355392	0.435546	FOX{F1,F2,J1}.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr14_+_63752151_63752250	0.435007	FOX{F1,F2,J1}.p2	M14222|Ctsb|13030|cathepsin B	AK190209|Ctsb|13030|cathepsin B	AK190539|Ctsb|13030|cathepsin B	AK191055|Ctsb|13030|cathepsin B	AK191391|Ctsb|13030|cathepsin B	AK196955|Ctsb|13030|cathepsin B	AK198213|Ctsb|13030|cathepsin B	AK199268|Ctsb|13030|cathepsin B	AK201893|Ctsb|13030|cathepsin B	AK202291|Ctsb|13030|cathepsin B	AK203639|Ctsb|13030|cathepsin B
mm9_v1_chr3_+_101949321_101949348	0.433627	FOX{F1,F2,J1}.p2	AK132122|Casq2|12373|calsequestrin 2
mm9_v1_chr16_+_22951183_22951214	0.431902	FOX{F1,F2,J1}.p2	AY135662|Hrg|94175|histidine-rich glycoprotein	AB055897|Hrg|94175|histidine-rich glycoprotein	BC011168|Hrg|94175|histidine-rich glycoprotein	AF194028|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chr19_+_46781939_46782006	0.431113	FOX{F1,F2,J1}.p2	AK006571|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AF166383|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AK011320|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	BC145663|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AK002801|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	BC013468|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr13_+_32893882_32893918	0.428359	FOX{F1,F2,J1}.p2	AK050368|Wrnip1|78903|Werner helicase interacting protein 1	AK167570|Wrnip1|78903|Werner helicase interacting protein 1	NM_030215|Wrnip1|78903|Werner helicase interacting protein 1	AK170542|Wrnip1|78903|Werner helicase interacting protein 1	BC010482|Wrnip1|78903|Werner helicase interacting protein 1	AK170846|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr19_+_58834208_58834253	0.427452	FOX{F1,F2,J1}.p2	AK008021|Pnliprp2|18947|pancreatic lipase-related protein 2	NM_011128|Pnliprp2|18947|pancreatic lipase-related protein 2	M30687|Pnliprp2|18947|pancreatic lipase-related protein 2	AK131882|Pnliprp2|18947|pancreatic lipase-related protein 2	BC094923|Pnliprp2|18947|pancreatic lipase-related protein 2
mm9_v1_chr5_-_86947601_86947624	0.426778	FOX{F1,F2,J1}.p2	BC118660|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	BC118611|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	AK036981|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	NM_177162|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene
mm9_v1_chr1_-_168339909_168339980	0.424759	FOX{F1,F2,J1}.p2	AK031716|Pogk|71592|pogo transposable element with KRAB domain	BC072587|Pogk|71592|pogo transposable element with KRAB domain	AK048067|Pogk|71592|pogo transposable element with KRAB domain	AK048752|Pogk|71592|pogo transposable element with KRAB domain	AK053898|Pogk|71592|pogo transposable element with KRAB domain	NM_001142948|Pogk|71592|pogo transposable element with KRAB domain	NM_175170|Pogk|71592|pogo transposable element with KRAB domain
mm9_v1_chr1_+_181891219_181891219	0.421407	FOX{F1,F2,J1}.p2	BC158017|Cdc42bpa|226751|CDC42 binding protein kinase alpha	BC158095|Cdc42bpa|226751|CDC42 binding protein kinase alpha	NM_001033285|Cdc42bpa|226751|CDC42 binding protein kinase alpha
mm9_v1_chr14_+_54878898_54878980	0.419679	FOX{F1,F2,J1}.p2	AK152595|Abhd4|105501|abhydrolase domain containing 4	AK049366|Abhd4|105501|abhydrolase domain containing 4	AK164655|Abhd4|105501|abhydrolase domain containing 4	AK161853|Abhd4|105501|abhydrolase domain containing 4	BC017532|Abhd4|105501|abhydrolase domain containing 4	NM_134076|Abhd4|105501|abhydrolase domain containing 4
mm9_v1_chr5_-_117565868_117565988	0.418121	FOX{F1,F2,J1}.p2	BC062176|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK010274|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK150633|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AF469109|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK043652|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK138947|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	BC055764|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK045475|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)
mm9_v1_chr2_-_34681707_34681829	0.411313	FOX{F1,F2,J1}.p2	AK033129|Fbxw2|30050|F-box and WD-40 domain protein 2	AK004015|Fbxw2|30050|F-box and WD-40 domain protein 2	AK005103|Fbxw2|30050|F-box and WD-40 domain protein 2	AK040764|Fbxw2|30050|F-box and WD-40 domain protein 2	AK145405|Fbxw2|30050|F-box and WD-40 domain protein 2	AK133758|Fbxw2|30050|F-box and WD-40 domain protein 2	AK045743|Fbxw2|30050|F-box and WD-40 domain protein 2	AK014858|Fbxw2|30050|F-box and WD-40 domain protein 2	AK184904|Fbxw2|30050|F-box and WD-40 domain protein 2	AK078815|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164769|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164770|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164772|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_013890|Fbxw2|30050|F-box and WD-40 domain protein 2	BC003834|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr7_-_25084567_25084655	0.411153	FOX{F1,F2,J1}.p2	NM_009561|Zfp61|22719|zinc finger protein 61	BC006618|Zfp61|22719|zinc finger protein 61
mm9_v1_chr5_+_114870772_114870878	0.401662	FOX{F1,F2,J1}.p2	
mm9_v1_chr5_+_54389740_54389855	0.400568	FOX{F1,F2,J1}.p2	AK173183|Stim2|116873|stromal interaction molecule 2	NM_001081103|Stim2|116873|stromal interaction molecule 2	AK080310|Stim2|116873|stromal interaction molecule 2	BC137881|Stim2|116873|stromal interaction molecule 2	BC145001|Stim2|116873|stromal interaction molecule 2
mm9_v1_chr5_-_144984420_144984479	0.399051	FOX{F1,F2,J1}.p2	AK032858|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK034020|Tecpr1|70381|tectonin beta-propeller repeat containing 1	BC046968|Tecpr1|70381|tectonin beta-propeller repeat containing 1	NM_027410|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK163522|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr19_-_39723518_39723548	0.397671	FOX{F1,F2,J1}.p2	BC092260|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	BC106142|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	NM_001024719|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	AK149389|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67
mm9_v1_chr8_+_23337748_23337837	0.390816	FOX{F1,F2,J1}.p2	BC029898|Thsd1|56229|thrombospondin, type I, domain 1	AK049636|Thsd1|56229|thrombospondin, type I, domain 1	BC051957|Thsd1|56229|thrombospondin, type I, domain 1	AK052555|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr6_+_73226746_73226754	0.389621	FOX{F1,F2,J1}.p2	AK194483|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr4_-_150026205_150026286	0.389245	FOX{F1,F2,J1}.p2	AK134677|Slc45a1|242773|solute carrier family 45, member 1	BC051188|Slc45a1|242773|solute carrier family 45, member 1	AK134683|Slc45a1|242773|solute carrier family 45, member 1	AK158002|Slc45a1|242773|solute carrier family 45, member 1	AK082651|Slc45a1|242773|solute carrier family 45, member 1	NM_173774|Slc45a1|242773|solute carrier family 45, member 1
mm9_v1_chr12_-_66174913_66174972	0.388385	FOX{F1,F2,J1}.p2	AF110812|Fkbp3|30795|FK506 binding protein 3	AK012346|Fkbp3|30795|FK506 binding protein 3	NM_013902|Fkbp3|30795|FK506 binding protein 3	AF135595|Fkbp3|30795|FK506 binding protein 3	AK168641|Fkbp3|30795|FK506 binding protein 3	BC002122|Fkbp3|30795|FK506 binding protein 3	AK145648|Fkbp3|30795|FK506 binding protein 3	AK150802|Fkbp3|30795|FK506 binding protein 3
mm9_v1_chr15_+_99984826_99984839	0.387165	FOX{F1,F2,J1}.p2	AK030064|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_172819|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137857|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137858|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm9_v1_chr4_-_141567551_141567551	0.384554	FOX{F1,F2,J1}.p2	NM_177868|Fhad1|329977|forkhead-associated (FHA) phosphopeptide binding domain 1
mm9_v1_chr4_+_141102699_141102736	0.3809	FOX{F1,F2,J1}.p2	AK082239|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene	AK043314|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene	AK148126|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene
mm9_v1_chr11_-_100683830_100683883	0.37928	FOX{F1,F2,J1}.p2	AY040231|Stat5b|20851|signal transducer and activator of transcription 5B	AY042906|Stat5b|20851|signal transducer and activator of transcription 5B	AY044901|Stat5b|20851|signal transducer and activator of transcription 5B	AY044902|Stat5b|20851|signal transducer and activator of transcription 5B	AY044903|Stat5b|20851|signal transducer and activator of transcription 5B	U21110|Stat5b|20851|signal transducer and activator of transcription 5B	AK088966|Stat5b|20851|signal transducer and activator of transcription 5B	AK154014|Stat5b|20851|signal transducer and activator of transcription 5B	NM_011489|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr9_+_117161650_117161701	0.378228	FOX{F1,F2,J1}.p2	
mm9_v1_chr1_-_74982118_74982188	0.377331	FOX{F1,F2,J1}.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr4_-_108506131_108506262	0.374928	FOX{F1,F2,J1}.p2	BC024920|Btf3l4|70533|basic transcription factor 3-like 4	BC058282|Btf3l4|70533|basic transcription factor 3-like 4	AK011367|Btf3l4|70533|basic transcription factor 3-like 4	AK167256|Btf3l4|70533|basic transcription factor 3-like 4	BC138215|Btf3l4|70533|basic transcription factor 3-like 4	BC138216|Btf3l4|70533|basic transcription factor 3-like 4	BC024612|Btf3l4|70533|basic transcription factor 3-like 4	AK013120|Btf3l4|70533|basic transcription factor 3-like 4	AK076283|Btf3l4|70533|basic transcription factor 3-like 4	NM_027453|Btf3l4|70533|basic transcription factor 3-like 4	AK004239|Btf3l4|70533|basic transcription factor 3-like 4
mm9_v1_chr5_-_137918291_137918291	0.371334	FOX{F1,F2,J1}.p2	NM_011741|Zan|22635|zonadhesin	U97068|Zan|22635|zonadhesin
mm9_v1_chr12_-_82069060_82069069	0.369858	FOX{F1,F2,J1}.p2	NM_001177561|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	NM_011387|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm9_v1_chr2_+_90894161_90894340	0.368162	FOX{F1,F2,J1}.p2	NM_008948|Psmc3|19182|proteasome (prosome, macropain) 26S subunit, ATPase 3	AK167002|Psmc3|19182|proteasome (prosome, macropain) 26S subunit, ATPase 3	AK167061|Psmc3|19182|proteasome (prosome, macropain) 26S subunit, ATPase 3	AK150189|Psmc3|19182|proteasome (prosome, macropain) 26S subunit, ATPase 3	D49686|Psmc3|19182|proteasome (prosome, macropain) 26S subunit, ATPase 3	BC005783|Psmc3|19182|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm9_v1_chr10_+_21601968_21601989	0.367784	FOX{F1,F2,J1}.p2	BC070401|Sgk1|20393|serum/glucocorticoid regulated kinase 1	NM_001161845|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr2_+_132512617_132512719	0.364152	FOX{F1,F2,J1}.p2	BC138171|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	AK004090|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chr11_-_61080588_61080704	0.360037	FOX{F1,F2,J1}.p2	BC003797|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	U14390|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK079571|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK079639|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK148462|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK163040|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK169157|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK170251|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	NM_007437|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK086262|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK051219|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK078243|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK170195|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152156|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152735|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152800|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK140932|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK159246|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2
mm9_v1_chr10_+_60938535_60938600	0.354093	FOX{F1,F2,J1}.p2	AK139384|Lrrc20|216011|leucine rich repeat containing 20	AK136380|Lrrc20|216011|leucine rich repeat containing 20	AK145920|Lrrc20|216011|leucine rich repeat containing 20	AK150142|Lrrc20|216011|leucine rich repeat containing 20	BC036304|Lrrc20|216011|leucine rich repeat containing 20	NM_153542|Lrrc20|216011|leucine rich repeat containing 20	AK150246|Lrrc20|216011|leucine rich repeat containing 20
mm9_v1_chr1_+_57831651_57831771	0.35367	FOX{F1,F2,J1}.p2	NM_144882|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK012791|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK019292|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK161988|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK031266|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	BC021879|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK032169|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr8_+_28164098_28164236	0.353427	FOX{F1,F2,J1}.p2	AK177358|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr17_-_18414529_18414529	0.352864	FOX{F1,F2,J1}.p2	NM_001104543|Vmn2r94|665227|vomeronasal 2, receptor 94
mm9_v1_chr3_-_90047433_90047433	0.352477	FOX{F1,F2,J1}.p2	AB182651|Creb3l4|78284|cAMP responsive element binding protein 3-like 4	AK019928|Creb3l4|78284|cAMP responsive element binding protein 3-like 4	NM_030080|Creb3l4|78284|cAMP responsive element binding protein 3-like 4
mm9_v1_chr13_+_21454688_21454753	0.350254	FOX{F1,F2,J1}.p2	AK129138|Zscan12|22758|zinc finger and SCAN domain containing 12	NM_016684|Zscan12|22758|zinc finger and SCAN domain containing 12	AK075886|Zscan12|22758|zinc finger and SCAN domain containing 12	AK139837|Zscan12|22758|zinc finger and SCAN domain containing 12	AK142005|Zscan12|22758|zinc finger and SCAN domain containing 12	BC027041|Zscan12|22758|zinc finger and SCAN domain containing 12
mm9_v1_chr7_-_133520899_133520943	0.350206	FOX{F1,F2,J1}.p2	BC026854|Spns1|73658|spinster homolog 1 (Drosophila)	AK033907|Spns1|73658|spinster homolog 1 (Drosophila)	AF212372|Spns1|73658|spinster homolog 1 (Drosophila)	AK154353|Spns1|73658|spinster homolog 1 (Drosophila)	AK166931|Spns1|73658|spinster homolog 1 (Drosophila)	AK008721|Spns1|73658|spinster homolog 1 (Drosophila)
mm9_v1_chr13_+_104968913_104969020	0.333864	FOX{F1,F2,J1}.p2	AK042070|Trim23|81003|tripartite motif-containing 23	AK018217|Trim23|81003|tripartite motif-containing 23	AK029533|Trim23|81003|tripartite motif-containing 23	AK030843|Trim23|81003|tripartite motif-containing 23	AK036210|Trim23|81003|tripartite motif-containing 23	AK088922|Trim23|81003|tripartite motif-containing 23	BC056390|Trim23|81003|tripartite motif-containing 23	BC059017|Trim23|81003|tripartite motif-containing 23
mm9_v1_chr14_-_59761715_59761729	0.330199	FOX{F1,F2,J1}.p2	AK015075|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	AK006084|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	AK007313|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	BC049552|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	NM_026461|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene
mm9_v1_chr11_+_68781623_68781690	0.322774	FOX{F1,F2,J1}.p2	AK171131|Slc25a35|71998|solute carrier family 25, member 35	AK007453|Slc25a35|71998|solute carrier family 25, member 35	NM_028048|Slc25a35|71998|solute carrier family 25, member 35	AK157873|Slc25a35|71998|solute carrier family 25, member 35	AK035739|Slc25a35|71998|solute carrier family 25, member 35	BC019996|Slc25a35|71998|solute carrier family 25, member 35
mm9_v1_chr4_-_116312481_116312553	0.317733	FOX{F1,F2,J1}.p2	AK181349|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr9_+_3335139_3335230	0.315805	FOX{F1,F2,J1}.p2	AK160783|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	BC050863|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	NM_026303|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)
mm9_v1_chr5_+_34185760_34185844	0.311783	FOX{F1,F2,J1}.p2	NM_001081102|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_001177884|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_175231|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	BC079668|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)
mm9_v1_chr13_-_55528131_55528182	0.304226	FOX{F1,F2,J1}.p2	BC037085|F12|58992|coagulation factor XII (Hageman factor)	X99571|F12|58992|coagulation factor XII (Hageman factor)	BC049867|F12|58992|coagulation factor XII (Hageman factor)	BC057921|F12|58992|coagulation factor XII (Hageman factor)	NM_021489|F12|58992|coagulation factor XII (Hageman factor)
mm9_v1_chr9_-_110892114_110892227	0.303927	FOX{F1,F2,J1}.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr2_+_133378934_133378934	0.300314	FOX{F1,F2,J1}.p2	BC100344|Bmp2|12156|bone morphogenetic protein 2	NM_007553|Bmp2|12156|bone morphogenetic protein 2
mm9_v1_chr5_+_144578694_144578848	0.299195	FOX{F1,F2,J1}.p2	AK014775|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK156492|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK158437|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	BC111035|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK173160|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK020887|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1
mm9_v1_chr18_-_36675393_36675437	0.298858	FOX{F1,F2,J1}.p2	L07264|Hbegf|15200|heparin-binding EGF-like growth factor	AK145548|Hbegf|15200|heparin-binding EGF-like growth factor	AK160575|Hbegf|15200|heparin-binding EGF-like growth factor	BC089607|Hbegf|15200|heparin-binding EGF-like growth factor	AK052084|Hbegf|15200|heparin-binding EGF-like growth factor
mm9_v1_chr2_+_34262301_34262360	0.296909	FOX{F1,F2,J1}.p2	AK132263|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr9_+_20016650_20016744	0.294343	FOX{F1,F2,J1}.p2	NM_146903|Olfr871|258905|olfactory receptor 871	BC119201|Olfr871|258905|olfactory receptor 871	BC119203|Olfr871|258905|olfactory receptor 871
mm9_v1_chr13_+_32893989_32894122	0.281891	FOX{F1,F2,J1}.p2	AB056151|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr5_+_110528987_110528987	0.281828	FOX{F1,F2,J1}.p2	BC039627|Plcxd1|403178|phosphatidylinositol-specific phospholipase C, X domain containing 1	NM_207279|Plcxd1|403178|phosphatidylinositol-specific phospholipase C, X domain containing 1
mm9_v1_chr12_+_7984451_7984482	0.278521	FOX{F1,F2,J1}.p2	BC100607|Apob|238055|apolipoprotein B	BC028880|Apob|238055|apolipoprotein B	BC038263|Apob|238055|apolipoprotein B	NM_009693|Apob|238055|apolipoprotein B
mm9_v1_chr19_-_38298606_38298649	0.273484	FOX{F1,F2,J1}.p2	NM_001081075|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene	AK172241|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene	AK017666|5730455O13Rik|70567|RIKEN cDNA 5730455O13 gene
mm9_v1_chr9_+_6168660_6168794	0.273134	FOX{F1,F2,J1}.p2	BC030896|Pdgfd|71785|platelet-derived growth factor, D polypeptide	AF335583|Pdgfd|71785|platelet-derived growth factor, D polypeptide
mm9_v1_chr4_+_45310018_45310039	0.272122	FOX{F1,F2,J1}.p2	AK011746|Rg9mtd3|69934|RNA (guanine-9-) methyltransferase domain containing 3	AK030465|Rg9mtd3|69934|RNA (guanine-9-) methyltransferase domain containing 3	NM_027266|Rg9mtd3|69934|RNA (guanine-9-) methyltransferase domain containing 3
mm9_v1_chr17_-_85082214_85082262	0.269987	FOX{F1,F2,J1}.p2	AK149569|Abcg5|27409|ATP-binding cassette, sub-family G (WHITE), member 5	BC106766|Abcg5|27409|ATP-binding cassette, sub-family G (WHITE), member 5	NM_031884|Abcg5|27409|ATP-binding cassette, sub-family G (WHITE), member 5
mm9_v1_chrX_-_76880891_76880920	0.269492	FOX{F1,F2,J1}.p2	AK167347|Mageb16|71967|melanoma antigen family B, 16	BC050207|Mageb16|71967|melanoma antigen family B, 16	NM_001113734|Mageb16|71967|melanoma antigen family B, 16
mm9_v1_chr17_-_85082309_85082350	0.267129	FOX{F1,F2,J1}.p2	AF312713|Abcg5|27409|ATP-binding cassette, sub-family G (WHITE), member 5	AY195872|Abcg5|27409|ATP-binding cassette, sub-family G (WHITE), member 5	AY195873|Abcg5|27409|ATP-binding cassette, sub-family G (WHITE), member 5
mm9_v1_chr6_+_30491641_30491643	0.266609	FOX{F1,F2,J1}.p2	NM_001024698|Cpa2|232680|carboxypeptidase A2, pancreatic
mm9_v1_chr1_+_51346086_51346100	0.265153	FOX{F1,F2,J1}.p2	AK084096|Sdpr|20324|serum deprivation response
mm9_v1_chr4_+_108000728_108000805	0.263868	FOX{F1,F2,J1}.p2	AK081388|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK044999|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	NM_027250|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK008518|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK168902|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK168344|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	BC012391|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene
mm9_v1_chr11_-_96777696_96777844	0.263213	FOX{F1,F2,J1}.p2	AK153951|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK077853|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	BC002318|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	NM_030248|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075791|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK165494|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075771|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK050014|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK149765|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK166476|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3
mm9_v1_chr17_+_72022598_72022608	0.26241	FOX{F1,F2,J1}.p2	NM_177087|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr9_-_115152128_115152185	0.254767	FOX{F1,F2,J1}.p2	
mm9_v1_chr19_+_8816292_8816349	0.253634	FOX{F1,F2,J1}.p2	AK166087|Stx5a|56389|syntaxin 5A	NM_019829|Stx5a|56389|syntaxin 5A	BC021883|Stx5a|56389|syntaxin 5A
mm9_v1_chr10_+_127691240_127691249	0.2535	FOX{F1,F2,J1}.p2	BC034832|Apon|28194|apolipoprotein N
mm9_v1_chr15_+_78237533_78237533	0.252803	FOX{F1,F2,J1}.p2	BC094469|Mpst|246221|mercaptopyruvate sulfurtransferase	NM_138670|Mpst|246221|mercaptopyruvate sulfurtransferase
mm9_v1_chr16_-_19706433_19706494	0.252186	FOX{F1,F2,J1}.p2	NM_177356|Lamp3|239739|lysosomal-associated membrane protein 3
mm9_v1_chr2_+_179805287_179805329	0.247358	FOX{F1,F2,J1}.p2	AK163448|Gtpbp5|52856|GTP binding protein 5	AK040689|Gtpbp5|52856|GTP binding protein 5	NM_001083328|Gtpbp5|52856|GTP binding protein 5	NM_001083329|Gtpbp5|52856|GTP binding protein 5	NM_028422|Gtpbp5|52856|GTP binding protein 5	NM_181424|Gtpbp5|52856|GTP binding protein 5	AK013710|Gtpbp5|52856|GTP binding protein 5	BC025144|Gtpbp5|52856|GTP binding protein 5
mm9_v1_chr7_-_5364746_5364746	0.245399	FOX{F1,F2,J1}.p2	AF324869|Vmn1r58|81014|vomeronasal 1 receptor 58	NM_030739|Vmn1r58|81014|vomeronasal 1 receptor 58
mm9_v1_chr7_+_13097884_13097899	0.239873	FOX{F1,F2,J1}.p2	AK013837|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC099547|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC087883|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	NM_028434|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene
mm9_v1_chr4_+_21654878_21654941	0.239378	FOX{F1,F2,J1}.p2	AK035762|Ccnc|51813|cyclin C	AK009615|Ccnc|51813|cyclin C	AK035728|Ccnc|51813|cyclin C	AK013273|Ccnc|51813|cyclin C	AK014079|Ccnc|51813|cyclin C	BC003344|Ccnc|51813|cyclin C	AK153035|Ccnc|51813|cyclin C	BC029211|Ccnc|51813|cyclin C	BC087544|Ccnc|51813|cyclin C	BC120649|Ccnc|51813|cyclin C	BC120677|Ccnc|51813|cyclin C	BC062376|Ccnc|51813|cyclin C	BC037689|Ccnc|51813|cyclin C
mm9_v1_chr13_+_8202111_8202186	0.239375	FOX{F1,F2,J1}.p2	AK134964|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK051460|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK043249|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139079|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139273|Adarb2|94191|adenosine deaminase, RNA-specific, B2	NM_052977|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC059822|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK046083|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK033916|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK045538|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC052426|Adarb2|94191|adenosine deaminase, RNA-specific, B2
mm9_v1_chr4_-_40886191_40886208	0.237727	FOX{F1,F2,J1}.p2	AK188292|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr18_-_38157190_38157227	0.23677	FOX{F1,F2,J1}.p2	AK053122|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	BC068145|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	AK220486|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	NM_139206|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
mm9_v1_chr1_+_57463594_57463619	0.223372	FOX{F1,F2,J1}.p2	AK165130|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	AK007831|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	BC071241|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr11_-_99283568_99283572	0.222426	FOX{F1,F2,J1}.p2	BC131911|Krt12|268482|keratin 12	AK143182|Krt12|268482|keratin 12	U02880|Krt12|268482|keratin 12	AK053362|Krt12|268482|keratin 12	NM_010661|Krt12|268482|keratin 12
mm9_v1_chr2_-_34681496_34681692	0.220096	FOX{F1,F2,J1}.p2	X54352|Fbxw2|30050|F-box and WD-40 domain protein 2	AK009893|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr9_+_121643763_121643808	0.218614	FOX{F1,F2,J1}.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr16_+_96366980_96367038	0.193813	FOX{F1,F2,J1}.p2	AK084688|Wrb|71446|tryptophan rich basic protein	AK172079|Wrb|71446|tryptophan rich basic protein	BC031769|Wrb|71446|tryptophan rich basic protein	NM_207301|Wrb|71446|tryptophan rich basic protein	AK021091|Wrb|71446|tryptophan rich basic protein
mm9_v1_chr6_+_87040212_87040221	0.192823	FOX{F1,F2,J1}.p2	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr11_-_120509650_120509650	0.191937	FOX{F1,F2,J1}.p2	NM_026751|Myadml2|68515|myeloid-associated differentiation marker-like 2
mm9_v1_chr1_+_187311172_187311232	0.191925	FOX{F1,F2,J1}.p2	AK017151|5033404E19Rik|114668|RIKEN cDNA 5033404E19 gene
mm9_v1_chr11_-_69476100_69476163	0.18402	FOX{F1,F2,J1}.p2	AK080233|Mpdu1|24070|mannose-P-dolichol utilization defect 1	NM_011900|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr7_-_53285651_53285671	0.182302	FOX{F1,F2,J1}.p2	AB028737|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	BC040400|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109740|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109741|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	NM_018795|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6
mm9_v1_chr4_-_88204148_88204148	0.177686	FOX{F1,F2,J1}.p2	BC116216|Gm12597|242517|predicted gene 12597	NM_206870|Gm12597|242517|predicted gene 12597
mm9_v1_chrY_+_234230_234474	0.172095	FOX{F1,F2,J1}.p2	AK047790|Kdm5d|20592|lysine (K)-specific demethylase 5D	NM_011419|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK141096|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK140971|Kdm5d|20592|lysine (K)-specific demethylase 5D	BC060077|Kdm5d|20592|lysine (K)-specific demethylase 5D	AF127244|Kdm5d|20592|lysine (K)-specific demethylase 5D	AB221607|Kdm5d|20592|lysine (K)-specific demethylase 5D	Z29652|Kdm5d|20592|lysine (K)-specific demethylase 5D
mm9_v1_chr5_+_125343060_125343124	0.167679	FOX{F1,F2,J1}.p2	AK143192|Zfp664|269704|zinc finger protein 664	AK086580|Zfp664|269704|zinc finger protein 664	AK039671|Zfp664|269704|zinc finger protein 664	NM_001081750|Zfp664|269704|zinc finger protein 664	AK165974|Zfp664|269704|zinc finger protein 664
mm9_v1_chrX_+_109608882_109608925	0.166017	FOX{F1,F2,J1}.p2	AK017156|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	NM_001168590|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	NM_026333|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	AK008319|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	BC139480|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	BC139481|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene
mm9_v1_chr15_+_77529318_77529334	0.16509	FOX{F1,F2,J1}.p2	BC085284|Apol7b|278679|apolipoprotein L 7b	NM_001024848|Apol7b|278679|apolipoprotein L 7b	NM_001134802|Apol7e|666348|apolipoprotein L 7e	AK134162|Apol7e|666348|apolipoprotein L 7e
mm9_v1_chr15_-_89207467_89207531	0.164401	FOX{F1,F2,J1}.p2	AB060274|Tymp|72962|thymidine phosphorylase	NM_138302|Tymp|72962|thymidine phosphorylase
mm9_v1_chr17_+_85082470_85082482	0.162781	FOX{F1,F2,J1}.p2	AF324495|Abcg8|67470|ATP-binding cassette, sub-family G (WHITE), member 8	AY196215|Abcg8|67470|ATP-binding cassette, sub-family G (WHITE), member 8	AY196216|Abcg8|67470|ATP-binding cassette, sub-family G (WHITE), member 8	NM_026180|Abcg8|67470|ATP-binding cassette, sub-family G (WHITE), member 8
mm9_v1_chr5_-_124804538_124804560	0.160933	FOX{F1,F2,J1}.p2	BC103772|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr18_-_36926866_36926900	0.159724	FOX{F1,F2,J1}.p2	
mm9_v1_chrX_-_151582391_151582391	0.158944	FOX{F1,F2,J1}.p2	BC100353|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene	NM_001081671|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene
mm9_v1_chr2_+_146681579_146681639	0.158001	FOX{F1,F2,J1}.p2	BC150844|Plk1s1|228730|polo-like kinase 1 substrate 1	BC150845|Plk1s1|228730|polo-like kinase 1 substrate 1	AK135486|Plk1s1|228730|polo-like kinase 1 substrate 1	NM_001033298|Plk1s1|228730|polo-like kinase 1 substrate 1
mm9_v1_chr4_+_138281239_138281239	0.156628	FOX{F1,F2,J1}.p2	NM_008868|Pla2g2c|18781|phospholipase A2, group IIC
mm9_v1_chr8_+_122223908_122223946	0.156355	FOX{F1,F2,J1}.p2	AK137687|Atp2c2|69047|ATPase, Ca++ transporting, type 2C, member 2	NM_026922|Atp2c2|69047|ATPase, Ca++ transporting, type 2C, member 2
mm9_v1_chr18_-_6202199_6202203	0.154805	FOX{F1,F2,J1}.p2	AK038217|Kif5b|16573|kinesin family member 5B
mm9_v1_chr10_-_75931858_75931858	0.154332	FOX{F1,F2,J1}.p2	BC057308|Ybey|216119|ybeY metallopeptidase	NM_172550|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr10_+_42481292_42481301	0.154272	FOX{F1,F2,J1}.p2	BC059816|Sec63|140740|SEC63-like (S. cerevisiae)	NM_153055|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr6_+_41901626_41901631	0.154079	FOX{F1,F2,J1}.p2	NM_027832|Sval1|71578|seminal vesicle antigen-like 1	AK018661|Sval1|71578|seminal vesicle antigen-like 1	BC114422|Sval1|71578|seminal vesicle antigen-like 1
mm9_v1_chr5_-_146345525_146345567	0.151944	FOX{F1,F2,J1}.p2	BC138084|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	BC138083|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B
mm9_v1_chr6_-_130336891_130336991	0.151785	FOX{F1,F2,J1}.p2	AY078436|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	NM_016659|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF419250|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF444273|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1
mm9_v1_chr2_-_131178551_131178627	0.144368	FOX{F1,F2,J1}.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr3_+_135011000_135011069	0.143702	FOX{F1,F2,J1}.p2	AK029525|Nhedc1|74446|Na+/H+ exchanger domain containing 1	NM_028946|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK007064|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK015318|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK016883|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK016917|Nhedc1|74446|Na+/H+ exchanger domain containing 1	BC025002|Nhedc1|74446|Na+/H+ exchanger domain containing 1
mm9_v1_chr6_+_41810237_41810337	0.138107	FOX{F1,F2,J1}.p2	BC119343|Sval2|84543|seminal vesicle antigen-like 2	BC119345|Sval2|84543|seminal vesicle antigen-like 2	AB050614|Sval2|84543|seminal vesicle antigen-like 2	NM_032542|Sval2|84543|seminal vesicle antigen-like 2
mm9_v1_chr12_+_85393093_85393100	0.135449	FOX{F1,F2,J1}.p2	AY563098|Acot3|171281|acyl-CoA thioesterase 3	AY563097|Acot3|171281|acyl-CoA thioesterase 3	NM_134246|Acot3|171281|acyl-CoA thioesterase 3
mm9_v1_chr16_+_15637951_15637990	0.1312	FOX{F1,F2,J1}.p2	AK084827|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	NM_011159|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	AB011543|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	AB007544|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	D87521|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide
mm9_v1_chr16_-_36071600_36071716	0.129762	FOX{F1,F2,J1}.p2	AK009946|Fam162a|70186|family with sequence similarity 162, member A	NM_027342|Fam162a|70186|family with sequence similarity 162, member A	BC010826|Fam162a|70186|family with sequence similarity 162, member A	AK033568|Fam162a|70186|family with sequence similarity 162, member A
mm9_v1_chr9_-_77391865_77391878	0.128367	FOX{F1,F2,J1}.p2	AK082721|Lrrc1|214345|leucine rich repeat containing 1	NM_172528|Lrrc1|214345|leucine rich repeat containing 1	AK053293|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr1_+_135206360_135206408	0.126814	FOX{F1,F2,J1}.p2	AY707855|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	BC024448|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK002581|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK141378|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	NM_026680|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)
mm9_v1_chr7_-_107756791_107756814	0.125791	FOX{F1,F2,J1}.p2	AK007653|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr8_-_119517339_119517451	0.125075	FOX{F1,F2,J1}.p2	AK003788|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	AK019983|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	NM_026572|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	BC014745|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)	AK050373|Gcsh|68133|glycine cleavage system protein H (aminomethyl carrier)
mm9_v1_chr19_-_5801011_5801112	0.124428	FOX{F1,F2,J1}.p2	AK008790|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr10_-_13108775_13108775	0.12322	FOX{F1,F2,J1}.p2	AK139466|Phactr2|215789|phosphatase and actin regulator 2	NM_001195066|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr11_-_106650166_106650257	0.122846	FOX{F1,F2,J1}.p2	AK166698|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr1_+_36568707_36568722	0.122013	FOX{F1,F2,J1}.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr14_-_56402855_56402888	0.11733	FOX{F1,F2,J1}.p2	AF442771|Adcy4|104110|adenylate cyclase 4	BC015299|Adcy4|104110|adenylate cyclase 4	NM_080435|Adcy4|104110|adenylate cyclase 4	AK161880|Adcy4|104110|adenylate cyclase 4	AK141767|Adcy4|104110|adenylate cyclase 4
mm9_v1_chr3_+_10366906_10366982	0.113173	FOX{F1,F2,J1}.p2	AK010707|Chmp4c|66371|chromatin modifying protein 4C	AK166371|Chmp4c|66371|chromatin modifying protein 4C	AK145033|Chmp4c|66371|chromatin modifying protein 4C	AK009273|Chmp4c|66371|chromatin modifying protein 4C	NM_025519|Chmp4c|66371|chromatin modifying protein 4C	AK160189|Chmp4c|66371|chromatin modifying protein 4C	BC115983|Chmp4c|66371|chromatin modifying protein 4C	BC117538|Chmp4c|66371|chromatin modifying protein 4C
mm9_v1_chr5_+_48374328_48374415	0.112561	FOX{F1,F2,J1}.p2	AK053182|Slit2|20563|slit homolog 2 (Drosophila)	AK053913|Slit2|20563|slit homolog 2 (Drosophila)	AK144573|Slit2|20563|slit homolog 2 (Drosophila)	NM_178804|Slit2|20563|slit homolog 2 (Drosophila)	AK084012|Slit2|20563|slit homolog 2 (Drosophila)	AK084293|Slit2|20563|slit homolog 2 (Drosophila)
mm9_v1_chr2_+_38853828_38853850	0.111779	FOX{F1,F2,J1}.p2	NM_029687|Wdr38|76646|WD repeat domain 38	AK007246|Wdr38|76646|WD repeat domain 38	BC115629|Wdr38|76646|WD repeat domain 38
mm9_v1_chr18_+_34701966_34701981	0.109799	FOX{F1,F2,J1}.p2	Z68889|Wnt8a|20890|wingless-related MMTV integration site 8A	BC119212|Wnt8a|20890|wingless-related MMTV integration site 8A	BC120517|Wnt8a|20890|wingless-related MMTV integration site 8A	NM_009290|Wnt8a|20890|wingless-related MMTV integration site 8A
mm9_v1_chr13_-_67162084_67162105	0.108607	FOX{F1,F2,J1}.p2	AK019536|Zfp712|78251|zinc finger protein 712	NM_001166218|Zfp712|78251|zinc finger protein 712
mm9_v1_chr16_+_56075506_56075529	0.105053	FOX{F1,F2,J1}.p2	AK040314|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003971|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003972|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003973|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_025483|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr16_-_19706392_19706422	0.103905	FOX{F1,F2,J1}.p2	AK028039|Lamp3|239739|lysosomal-associated membrane protein 3	AK033379|Lamp3|239739|lysosomal-associated membrane protein 3	AK086898|Lamp3|239739|lysosomal-associated membrane protein 3	AK164915|Lamp3|239739|lysosomal-associated membrane protein 3
mm9_v1_chr7_-_26175113_26175168	0.101	FOX{F1,F2,J1}.p2	BC021642|Lipe|16890|lipase, hormone sensitive	AK169858|Lipe|16890|lipase, hormone sensitive	NM_001039507|Lipe|16890|lipase, hormone sensitive
mm9_v1_chr8_-_46347363_46347377	0.0973743	FOX{F1,F2,J1}.p2	BC019485|F11|109821|coagulation factor XI	AF356627|F11|109821|coagulation factor XI
mm9_v1_chr6_+_34659440_34659540	0.0923479	FOX{F1,F2,J1}.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr14_+_117324518_117324572	0.0914904	FOX{F1,F2,J1}.p2	AK164668|Gpc6|23888|glypican 6	AK135442|Gpc6|23888|glypican 6	NM_001079844|Gpc6|23888|glypican 6	NM_011821|Gpc6|23888|glypican 6
mm9_v1_chr7_-_4636141_4636274	0.0903862	FOX{F1,F2,J1}.p2	AF338351|Hspbp1|66245|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
mm9_v1_chr6_-_137519272_137519292	0.0891483	FOX{F1,F2,J1}.p2	AK155022|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr6_-_41396095_41396143	0.0869873	FOX{F1,F2,J1}.p2	NM_001103153|Gm10334|100040233|predicted gene 10334	BC141304|Prss3|22073|protease, serine, 3
mm9_v1_chr8_+_32239179_32239274	0.0868417	FOX{F1,F2,J1}.p2	AK004356|Rnf122|68867|ring finger protein 122
mm9_v1_chr12_-_82068951_82069043	0.0832029	FOX{F1,F2,J1}.p2	U95131|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	U95132|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	AB003303|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	BC021154|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm9_v1_chr14_+_48092244_48092299	0.0829184	FOX{F1,F2,J1}.p2	BC049155|Fbxo34|78938|F-box protein 34	AK013711|Fbxo34|78938|F-box protein 34
mm9_v1_chr4_+_142984330_142984343	0.0826722	FOX{F1,F2,J1}.p2	AF285578|Pramel1|83491|preferentially expressed antigen in melanoma-like 1	BC131995|Pramel1|83491|preferentially expressed antigen in melanoma-like 1	BC132399|Pramel1|83491|preferentially expressed antigen in melanoma-like 1	NM_031377|Pramel1|83491|preferentially expressed antigen in melanoma-like 1
mm9_v1_chr5_+_31829364_31829413	0.0759648	FOX{F1,F2,J1}.p2	AK149108|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	NM_009206|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	AK160250|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	BC072588|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein	AK138398|Slc4a1ap|20534|solute carrier family 4 (anion exchanger), member 1, adaptor protein
mm9_v1_chr5_-_37187799_37187854	0.0758307	FOX{F1,F2,J1}.p2	BC085488|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr5_+_30768422_30768461	0.0720392	FOX{F1,F2,J1}.p2	AK006710|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene	BC060996|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene	AK005574|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene	NM_029285|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene
mm9_v1_chr19_+_42164922_42164992	0.0709548	FOX{F1,F2,J1}.p2	NM_145501|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	AK030725|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC110363|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC089309|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha
mm9_v1_chr14_+_31692419_31692442	0.0682851	FOX{F1,F2,J1}.p2	NM_181390|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1
mm9_v1_chr2_+_127680363_127680363	0.0676629	FOX{F1,F2,J1}.p2	AK004775|Acoxl|74121|acyl-Coenzyme A oxidase-like	NM_028765|Acoxl|74121|acyl-Coenzyme A oxidase-like
mm9_v1_chr6_+_48504791_48504950	0.0642662	FOX{F1,F2,J1}.p2	AK143222|Lrrc61|243371|leucine rich repeat containing 61	NM_001110160|Lrrc61|243371|leucine rich repeat containing 61	NM_177736|Lrrc61|243371|leucine rich repeat containing 61	AK171463|Lrrc61|243371|leucine rich repeat containing 61	AK170792|Lrrc61|243371|leucine rich repeat containing 61	AK136901|Lrrc61|243371|leucine rich repeat containing 61	BC027309|Lrrc61|243371|leucine rich repeat containing 61
mm9_v1_chr16_+_23290588_23290591	0.0607076	FOX{F1,F2,J1}.p2	D16106|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr15_+_39577477_39577489	0.0563819	FOX{F1,F2,J1}.p2	AB109560|Tm7sf4|75766|transmembrane 7 superfamily member 4	AB109561|Tm7sf4|75766|transmembrane 7 superfamily member 4	AK014697|Tm7sf4|75766|transmembrane 7 superfamily member 4	AK154384|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517483|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517484|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517485|Tm7sf4|75766|transmembrane 7 superfamily member 4	NM_029422|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC139146|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC145557|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC145558|Tm7sf4|75766|transmembrane 7 superfamily member 4
mm9_v1_chr1_-_99024782_99024879	0.0510292	FOX{F1,F2,J1}.p2	BC139066|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	BC139067|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK132668|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK161249|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK016647|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK029505|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	NM_028942|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1
mm9_v1_chr10_+_17516024_17516131	0.0449768	FOX{F1,F2,J1}.p2	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr10_-_80729645_80729680	0.0429166	FOX{F1,F2,J1}.p2	AK009657|Mrpl54|66047|mitochondrial ribosomal protein L54	BC056985|Mrpl54|66047|mitochondrial ribosomal protein L54	AK002348|Mrpl54|66047|mitochondrial ribosomal protein L54	AK003225|Mrpl54|66047|mitochondrial ribosomal protein L54	NM_025317|Mrpl54|66047|mitochondrial ribosomal protein L54
mm9_v1_chr15_+_25682945_25682960	0.0375257	FOX{F1,F2,J1}.p2	AK161653|Myo10|17909|myosin X
mm9_v1_chr4_+_118081908_118082012	0.0318737	FOX{F1,F2,J1}.p2	AK011080|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_020000|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_173719|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK147032|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK005422|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK148025|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC051683|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK008759|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC021870|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AB041805|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm9_v1_chr2_-_160698705_160698728	0.0243432	FOX{F1,F2,J1}.p2	AK143296|Zhx3|320799|zinc fingers and homeoboxes 3	BC058111|Zhx3|320799|zinc fingers and homeoboxes 3	NM_177263|Zhx3|320799|zinc fingers and homeoboxes 3
mm9_v1_chr5_-_31829057_31829098	0.0231816	FOX{F1,F2,J1}.p2	BC031447|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like	AK012134|Supt7l|72195|suppressor of Ty 7 (S. cerevisiae)-like
mm9_v1_chr2_-_60511707_60511810	0.0200719	FOX{F1,F2,J1}.p2	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr7_-_86293852_86293959	0.0197384	FOX{F1,F2,J1}.p2	AB021130|Mfge8|17304|milk fat globule-EGF factor 8 protein	AB025280|Mfge8|17304|milk fat globule-EGF factor 8 protein	Y11684|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK209209|Mfge8|17304|milk fat globule-EGF factor 8 protein	BC018577|Mfge8|17304|milk fat globule-EGF factor 8 protein	BC003904|Mfge8|17304|milk fat globule-EGF factor 8 protein	BC003892|Mfge8|17304|milk fat globule-EGF factor 8 protein	M38337|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK089211|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK145183|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK169997|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK170935|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK171143|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK148371|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK087555|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK152088|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK155047|Mfge8|17304|milk fat globule-EGF factor 8 protein	NM_001045489|Mfge8|17304|milk fat globule-EGF factor 8 protein	NM_008594|Mfge8|17304|milk fat globule-EGF factor 8 protein
mm9_v1_chr12_-_86039703_86039802	0.0134949	FOX{F1,F2,J1}.p2	AY993933|Tmem90a|627191|transmembrane protein 90a	AK140195|Tmem90a|627191|transmembrane protein 90a	NM_001033334|Tmem90a|627191|transmembrane protein 90a	AY993934|Tmem90a|627191|transmembrane protein 90a
mm9_v1_chr1_+_132628552_132628703	0.00952865	FOX{F1,F2,J1}.p2	AK053179|AA986860|212439|expressed sequence AA986860	NM_177604|AA986860|212439|expressed sequence AA986860	AK028957|AA986860|212439|expressed sequence AA986860	AK086121|AA986860|212439|expressed sequence AA986860
mm9_v1_chr4_+_143379236_143379267	0.00544875	FOX{F1,F2,J1}.p2	NM_001007077|Gm13023|194227|predicted gene 13023	AK135972|Gm13023|194227|predicted gene 13023	BC084594|Gm13023|194227|predicted gene 13023
mm9_v1_chr7_-_29123383_29123453	0.00393508	FOX{F1,F2,J1}.p2	BC058598|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)
mm9_v1_chr17_+_25445590_25445590	0.00368569	FOX{F1,F2,J1}.p2	AK144498|Prss28|114661|protease, serine, 28	NM_053259|Prss28|114661|protease, serine, 28
mm9_v1_chr17_+_25015186_25015209	0.00114925	FOX{F1,F2,J1}.p2	AK220290|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit
